RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ATXN3P54252 364 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-203ENST00000391855 GALCP54803 685 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 IRX4P78413 519 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 FOXK2Q01167 660 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 ASTE1Q2TB18 679 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-203ENST00000391855 KIAA0895LQ68EN5 471 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 LINGO4Q6UY18 593 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 H2AFVQ71UI9 128 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 DGLUCYQ7Z3D6 616 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 AADATQ8N5Z0 425 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 ARFGAP1Q8N6T3 406 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 OR2A12Q8NGT7 310 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 PIP4K2CQ8TBX8 421 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 TEKT4Q8WW24 435 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 LRIG1Q96JA1 1093 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 PEBP4Q96S96 227 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 MAGEB5Q9BZ81 275 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
GGPS1-203ENST00000391855 ZWILCHQ9H900 591 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 DYRK4Q9NR20 520 aa12.93□□□□□ -0.34
GGPS1-203ENST00000391855 AKR1B15C9JRZ8 316 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 H3BRJ5 948 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 DAPK3O43293 454 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 SMAD6O43541 496 aaKnown RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 BNIP3LO60238 219 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 GSRP00390 522 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 TMEM253P0C7T8 217 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ENGP17813 658 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 CD27P26842 260 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 DRD3P35462 400 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ARL4AP40617 200 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 CCR5P51681 352 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ADPRHP54922 357 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 DPYSL2Q16555 572 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 HADHQ16836 314 aaKnown RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 INO80DQ53TQ3 878 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 RFX8Q6ZV50 586 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 LZTR1Q8N653 840 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ZNF564Q8TBZ8 553 aaPredicted RBP12.92□□□□□ -0.34
GGPS1-203ENST00000391855 SNX19Q92543 992 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 BIRC7Q96CA5 298 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ARHGEF26Q96DR7 871 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 CCDC42Q96M95 316 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 NEUROG2Q9H2A3 272 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 RXFP3Q9NSD7 469 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 GPATCH2LQ9NWQ4 482 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 CTTNBP2NLQ9P2B4 639 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 IL36AQ9UHA7 158 aa12.92□□□□□ -0.34
GGPS1-203ENST00000391855 ARHGAP42A6NI28 874 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 RASA4BC9J798 803 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 K7ERQ8 282 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 KPNA3O00505 521 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 RASA4O43374 803 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 PLRG1O43660 514 aaKnown RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 FSBPO95073 299 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 MAOBP27338 520 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 SNRPD1P62314 119 aaKnown RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 TEAD4Q15561 434 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 CA9Q16790 459 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 NCEH1Q6PIU2 408 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 IL27RAQ6UWB1 636 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 OR14C36Q8NHC7 312 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 MRFAP1L1Q96HT8 127 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 KCTD15Q96SI1 283 aaPredicted RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 HEPHQ9BQS7 1158 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 PREBQ9HCU5 417 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 EIF2B4Q9UI10 523 aaKnown RBP12.91□□□□□ -0.34
GGPS1-203ENST00000391855 PCDH15Q96QU1 1955 aa12.91□□□□□ -0.34
GGPS1-203ENST00000391855 A0A1W2PPC4 97 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 FAM47DPA6NHR8 397 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 C10orf142B7Z368 130 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 BUB1O43683 1085 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 CD160O95971 181 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 GRIA4P48058 902 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 RAD51Q06609 339 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 SERINC3Q13530 473 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 AGBL4Q5VU57 503 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 NEK5Q6P3R8 708 aa12.9□□□□□ -0.34
GGPS1-203ENST00000391855 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
GGPS1-203ENST00000391855 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms