RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 PSMD8P48556 350 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 TPMTP51580 245 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 LPAL2Q16609 132 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 PMS2CLQ68D20 193 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 USP30Q70CQ3 517 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 PLPP6Q8IY26 295 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 FAM160A2Q8N612 972 aaPredicted RBP15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 OR2A12Q8NGT7 310 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 RAPGEF5Q92565 580 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 LOXL4Q96JB6 756 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 DUSP15Q9H1R2 295 aaPredicted RBP15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 TNKS2Q9H2K2 1166 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 GOLPH3Q9H4A6 298 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 CD93Q9NPY3 652 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 ETNK2Q9NVF9 386 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 MBD1Q9UIS9 605 aaPredicted RBP15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 NCKAP1Q9Y2A7 1128 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 MFHAS1Q9Y4C4 1052 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 ACTL7AQ9Y615 435 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
IGHV3-53-201ENST00000390627 MACROD2A1Z1Q3 448 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 MID1O15344 667 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 GFRA3O60609 400 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 NDUFS2O75306 463 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 PRNPP04156 253 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 SLC8A1P32418 973 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 DNA2P51530 1060 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 IL10RBQ08334 325 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 RFTN1Q14699 578 aaPredicted RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 CARD16Q5EG05 197 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 NCBP2-AS2Q69YL0 99 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 ASCL5Q7RTU5 278 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 FRMD1Q8N878 549 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 PCDH19Q8TAB3 1148 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 GANCQ8TET4 914 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 TOE1Q96GM8 510 aaKnown RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 TM6SF2Q9BZW4 377 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 PDFQ9HBH1 243 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 FBXL12Q9NXK8 326 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 NCDNQ9UBB6 729 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 IL36AQ9UHA7 158 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 SPAG17Q6Q759 2223 aa15.31■□□□□ 0.04
IGHV3-53-201ENST00000390627 J3KR12 359 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 KRT86O43790 486 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 MFSD11O43934 449 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZNF821O75541 412 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 IGSF6O95976 241 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 GSRP00390 522 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 RETP07949 1114 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCDC175P0C221 793 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 CHRNA3P32297 505 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCNHP51946 323 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 RHOAP61586 193 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCZ1BP86790 482 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 DPY19L3Q6ZPD9 716 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 OR2AP1Q8NGE2 309 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 KIAA1524Q8TCG1 905 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 NUP205Q92621 2012 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 RUBCNQ92622 972 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 GDAP1L1Q96MZ0 367 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 RNF157Q96PX1 679 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 OMDQ99983 421 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 HEPHQ9BQS7 1158 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 BTBD1Q9H0C5 482 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 SGK2Q9HBY8 427 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 WSB2Q9NYS7 404 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 MYO15AQ9UKN7 3530 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 PPM1HQ9ULR3 514 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 FZD4Q9ULV1 537 aa15.3■□□□□ 0.04
IGHV3-53-201ENST00000390627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 A0A1W2PP55 124 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 GRID2IPA4D2P6 1211 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 C3orf70A6NLC5 250 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 APOL1O14791 398 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 PALMO75781 387 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RNASEH2AO75792 299 aaKnown RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 EPN2O95208 641 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 ZFXP17010 805 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 RAD51Q06609 339 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 CCDC15Q0P6D6 951 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 TMCO4Q5TGY1 634 aa15.29■□□□□ 0.04
IGHV3-53-201ENST00000390627 ARHGAP36Q6ZRI8 547 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms