RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MST1P26927 711 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PCSK1P29120 753 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EPHA8P29322 1005 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ADSLP30566 484 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC6A4P31645 630 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CHRNA7P36544 502 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 IGHMBP2P38935 993 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DCTP40126 519 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GRIA2P42262 883 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MAPK9P45984 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SERPINB4P48594 390 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RPL34P49207 117 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CPT1AP50416 773 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ERFP50548 548 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 JAK3P52333 1124 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EFNA5P52803 228 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TERF1P54274 439 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 POLE2P56282 527 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TBX4P57082 545 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TAS2R38P59533 333 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CTXN1P60606 82 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ABCE1P61221 599 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR5P61964 334 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ARHGAP8P85298 464 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 IL9RQ01113 521 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SP2Q02086 613 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EGFEM1PQ0D2K5 195 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TBL3Q12788 808 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TCF15Q12870 199 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MYO1EQ12965 1108 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE1Q13065 139 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE4Q13068 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE5Q13069 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE6Q13070 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MTM1Q13496 603 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RUNX3Q13761 415 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 UBE4AQ14139 1066 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MRPL58Q14197 206 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 HSP90AA2PQ14568 343 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NR1D2Q14995 579 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MLC1Q15049 377 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PUM3Q15397 648 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CLUL1Q15846 466 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NTRK3Q16288 839 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PPP2R5EQ16537 467 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUSP6Q16828 381 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ARHGAP44Q17R89 818 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 COL28A1Q2UY09 1125 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PTCHD3Q3KNS1 767 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ANXA2RQ3ZCQ2 193 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CHRFAM7AQ494W8 412 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SETMARQ53H47 684 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ALG10Q5BKT4 473 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ALG10BQ5I7T1 473 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EEF1AKMT2Q5JPI9 291 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR38Q5JTN6 314 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FFAR4Q5NUL3 377 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC10A5Q5PT55 438 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 UTF1Q5T230 341 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ATAD3CQ5T2N8 411 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GPR158Q5T848 1215 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PRR9Q5T870 116 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ARHGAP40Q5TG30 622 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF658Q5TYW1 1059 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LIPMQ5VYY2 423 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TYW3Q6IPR3 259 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LCN10Q6JVE6 187 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RGS7BPQ6MZT1 257 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 XRRA1Q6P2D8 792 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 BHLHB9Q6PI77 547 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC25A34Q6PIV7 304 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L9Q6RFH8 374 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM108Q6UXF1 575 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 UNQ6494/PRO21346Q6UXR6 183 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GFRALQ6UXV0 394 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NSMFQ6X4W1 530 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMS3Q6XE24 437 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GLDNQ6ZMI3 551 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF852Q6ZMS4 543 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF841Q6ZN19 808 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 OVCH1Q7RTY7 1134 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ERMP1Q7Z2K6 904 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TFAP2DQ7Z6R9 452 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TRPT1Q86TN4 253 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TRABD2AQ86V40 505 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PROSER2Q86WR7 435 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NT5DC4Q86YG4 428 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GPSM1Q86YR5 675 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 P3H2Q8IVL5 708 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SFTPA2Q8IWL1 248 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CHERPQ8IWX8 916 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MKXQ8IYA7 352 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LAS2Q8IYD9 372 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MYOCDQ8IZQ8 938 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SPICE1Q8N0Z3 855 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SCML4Q8N228 414 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 C17orf53Q8N3J3 647 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM57Q8N5G2 664 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC25A41Q8N5S1 370 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms