RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 PSTKQ8IV42 348 aaKnown RBP12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 PLEKHG4BQ96PX9 1271 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 DNAAF2Q9NVR5 837 aaKnown RBP12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 COPG2Q9UBF2 871 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
CAPRIN1-202ENST00000389645 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 TK2O00142 265 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 ZNF623O75123 536 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 C2P06681 752 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 GEN1Q17RS7 908 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 RYBPQ8N488 228 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 RTP4Q96DX8 246 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 NUF2Q9BZD4 464 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 CYP4F12Q9HCS2 524 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 MOCS1Q9NZB8 636 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 PLA2G4CQ9UP65 541 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 GABRDO14764 452 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 MSI1O43347 362 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 SIN3BO75182 1162 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 PAX3P23760 479 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 EPHA3P29320 983 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 NAGLUP54802 743 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 FAM35AQ86V20 835 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 LINC01599Q8WXQ3 324 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 SFMBT1Q9UHJ3 866 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 RUVBL2Q9Y230 463 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 TET1Q8NFU7 2136 aa12.29□□□□□ -0.44
CAPRIN1-202ENST00000389645 DAB1O75553 588 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 CABYRO75952 493 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 LRIG2O94898 1065 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 SERPINA6P08185 405 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ENO3P13929 434 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 GNAZP19086 355 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ATP6V1C1P21283 382 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 CNTFP26441 200 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PLK1P53350 603 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ABCE1P61221 599 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 BLMHQ13867 455 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ANO7Q6IWH7 933 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 NPWQ8N729 165 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 SCAMP5Q8TAC9 235 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 URGCPQ8TCY9 931 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 HNRNPABQ99729 332 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 MOXD2PA6NHM9 499 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 DDHD2O94830 711 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 CHRNGP07510 517 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 NMBRP28336 390 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 GRIK1P39086 918 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 NUDT2P50583 147 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ZBTB17Q13105 803 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ANKRD20A4Q4UJ75 823 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ITPRIPL1Q6GPH6 555 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 TFAP2DQ7Z6R9 452 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 TDRD5Q8NAT2 981 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 NAT9Q9BTE0 207 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 NMRAL1Q9HBL8 299 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 TRAFD1O14545 582 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 GSTA2P09210 222 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 FGF3P11487 239 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 GATMP50440 423 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 SERPINB8P50452 374 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PCLAFQ15004 111 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 TRIP10Q15642 601 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 HPS6Q86YV9 775 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ACVR1CQ8NER5 493 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 SNRNP27Q8WVK2 155 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 USP13Q92995 863 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PABPC5Q96DU9 382 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 VPS39Q96JC1 886 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 CPNE1Q99829 537 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 RTP3Q9BQQ7 232 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 COG4Q9H9E3 785 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 ANLNQ9NQW6 1124 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 HCSTQ9UBK5 93 aa12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-202ENST00000389645 PRRC2BQ5JSZ5 2229 aaKnown RBP12.27□□□□□ -0.44
CAPRIN1-202ENST00000389645 TTC3P53804 2025 aa12.27□□□□□ -0.44
CAPRIN1-202ENST00000389645 PQBP1O60828 265 aaKnown RBP12.27□□□□□ -0.44
CAPRIN1-202ENST00000389645 KLHL2O95198 593 aa12.27□□□□□ -0.44
CAPRIN1-202ENST00000389645 AMHP03971 560 aa12.27□□□□□ -0.44
CAPRIN1-202ENST00000389645 HMBSP08397 361 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms