RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZBTB26Q9HCK0 441 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TRAF6Q9Y4K3 522 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 PAPSS1O43252 624 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ITGBL1O95965 494 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 EPHX2P34913 555 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 CCT8P50990 548 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 MAPK10P53779 464 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 PSME3P61289 254 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 FSTL1Q12841 308 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 TIGD2Q4W5G0 525 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 KCNT2Q6UVM3 1135 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 KLRG1Q96E93 195 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ADI1Q9BV57 179 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ANKMY1Q9P2S6 941 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 DNMT3BQ9UBC3 853 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ITM2BQ9Y287 266 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 PCDHGA7Q9Y5G6 932 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 ST14Q9Y5Y6 855 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 COL11A1P12107 1806 aaPredicted RBP14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 KIAA1217Q5T5P2 1943 aa14.88□□□□□ -0.03
VPS9D1-201ENST00000389386 SSC5DA1L4H1 1573 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 HDAC3O15379 428 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ALDH1A2O94788 518 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 MYO1DO94832 1006 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 KRT3P12035 628 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 GARTP22102 1010 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 POLR2BP30876 1174 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 OPRL1P41146 370 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TMEM132BQ14DG7 1078 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 NEDD8Q15843 81 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 PACRGLQ8N7B6 248 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 OR13F1Q8NGS4 319 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 PPWD1Q96BP3 646 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 FEM1CQ96JP0 617 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TANC1Q9C0D5 1861 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ILKAPQ9H0C8 392 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 MUC3BQ9H195 1237 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 KMT5AQ9NQR1 393 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 GABBR1Q9UBS5 961 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 E7ENX8 843 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TIPRLO75663 272 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 RGS20O76081 388 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 LYPLA2O95372 231 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ALOX5P09917 674 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 MPSTP25325 297 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 HPCAL1P37235 193 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ETFBP38117 255 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 MERTKQ12866 999 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TRAP1Q12931 704 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 PERM1Q5SV97 790 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 GPAT2Q6NUI2 795 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ITIH5Q86UX2 942 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 CBR4Q8N4T8 237 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 MINDY2Q8NBR6 621 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 BSNDQ8WZ55 320 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 TCF12Q99081 682 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 EFHD1Q9BUP0 239 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF518BQ9C0D4 1074 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 RABL2BQ9UNT1 228 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 PSAT1Q9Y617 370 aa14.87□□□□□ -0.03
VPS9D1-201ENST00000389386 HNRNPDLO14979 420 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 USP2O75604 605 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 RBL1P28749 1068 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MIPP30301 263 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 IFITM2Q01629 132 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 DMP1Q13316 513 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SLC36A3Q495N2 470 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SWSAP1Q6NVH7 229 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 PCDH20Q8N6Y1 951 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 FNIP1Q8TF40 1166 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SH3YL1Q96HL8 342 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 PSME2Q9UL46 239 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 GLTPD2A6NH11 291 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SAC3D1A6NKF1 404 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 A8MU76 341 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 CLDN25C9JDP6 229 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 G3V2L1 256 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 GRID2O43424 1007 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 KCNH1O95259 989 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 TYK2P29597 1187 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 GRIA1P42261 906 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF846Q147U1 533 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 DGKDQ16760 1214 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 STEAP4Q687X5 459 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SEL1L3Q68CR1 1132 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 CYP2R1Q6VVX0 501 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 CAMK1DQ8IU85 385 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 EXOC8Q8IYI6 725 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 ATP6V0D2Q8N8Y2 350 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 ABHD11Q8NFV4 315 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MTG1Q9BT17 334 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MRPL40Q9NQ50 206 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms