RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 AAK1Q2M2I8 961 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PLK5Q496M5 336 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 C5orf22Q49AR2 442 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FAM171A1Q5VUB5 890 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 IRAK1BP1Q5VVH5 260 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3GQ6DHY5 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3CQ6IPX1 549 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 STXBP4Q6ZWJ1 553 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SERPINA11Q86U17 422 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SLC9B2Q86UD5 537 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 GTSCR1Q86UQ5 136 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SFR1Q86XK3 245 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RASGRP3Q8IV61 690 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TBC1D3Q8IZP1 549 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CCDC33Q8N5R6 958 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF441Q8N8Z8 693 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TEX45Q8NA69 505 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ATP11CQ8NB49 1132 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 MAPK1IP1LQ8NDC0 245 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 DMBX1Q8NFW5 382 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RFWD2Q8NHY2 731 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 STT3BQ8TCJ2 826 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 GPT2Q8TD30 523 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CLEC4CQ8WTT0 213 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TMEM18Q96B42 140 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 REXO5Q96IC2 774 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SNX27Q96L92 541 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 C3orf30Q96M34 536 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ZNF385AQ96PM9 386 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 OR1F2PQ96R84 312 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 ATOH8Q96SQ7 321 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CSF3RQ99062 836 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 LITAFQ99732 161 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 EGFL8Q99944 293 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 DDX23Q9BUQ8 820 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 APOL5Q9BWW9 433 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 HDHD5Q9BXW7 423 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RTFDC1Q9BY42 306 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FRMD8Q9BZ67 464 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 UNKQ9C0B0 810 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 NPFFR1Q9GZQ6 430 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 XRN2Q9H0D6 950 aaKnown RBP eCLIP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CCDC134Q9H6E4 229 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FBRSL1Q9HCM7 1045 aaKnown RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 KCNK9Q9NPC2 374 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PCDH12Q9NPG4 1184 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RPS10P5Q9NQ39 176 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FSCN3Q9NQT6 498 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SLC7A10Q9NS82 523 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 C1orf112Q9NSG2 853 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TAAR2Q9P1P5 351 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 LRFN1Q9P244 771 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 FNIP2Q9P278 1114 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SEL1LQ9UBV2 794 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 SLC25A13Q9UJS0 675 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 TRPC5Q9UL62 973 aaPredicted RBP0.59□□□□□ -2.31
SNORD28-201ENST00000384706 KCNS2Q9ULS6 477 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CORO2BQ9UQ03 480 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CNTN6Q9UQ52 1028 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 VDAC3Q9Y277 283 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 KCNK7Q9Y2U2 307 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PAM16Q9Y3D7 125 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 PCDHGB6Q9Y5F9 930 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 RAI2Q9Y5P3 530 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 COL4A3BPQ9Y5P4 624 aa0.59□□□□□ -2.31
SNORD28-201ENST00000384706 CYP3A7-CYP3A51PA0A087WV96 503 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 LOC105369274A0A096LPK9 316 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 A0A0A0MQY5 61 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 LOC102723532A0A0G2JNH3 316 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 A0A0G2JPF8 293 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 E2F8A0AVK6 867 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 POM121BA6NF01 834 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 OR2W5A6NFC9 320 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 AGAP5A6NIR3 686 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 PMS2P5A8MQ11 134 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 HNRNPCL3B7ZW38 293 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 J3KR12 359 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 CHL1O00533 1208 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 TIMM23O14925 209 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 RNMTO43148 476 aaKnown RBP0.58□□□□□ -2.32
SNORD28-201ENST00000384706 HNRNPCL1O60812 293 aaKnown RBP0.58□□□□□ -2.32
SNORD28-201ENST00000384706 RFPL1O75677 317 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 SORBS2O94875 1100 aaKnown RBP0.58□□□□□ -2.32
SNORD28-201ENST00000384706 KDM4BO94953 1096 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 VNN2O95498 520 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 CYP3A4P08684 503 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 DHRS4L1P0CG22 281 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 HNRNPCL4P0DMR1 293 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 IGHV4-30-4P0DP06 118 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 PRG2P13727 222 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 GYS1P13807 737 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 TSHRP16473 764 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 EGR1P18146 543 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 RPL17P18621 184 aaKnown RBP0.58□□□□□ -2.32
SNORD28-201ENST00000384706 FGFR2P21802 821 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 CYP3A7P24462 503 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 PRKCHP24723 683 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 GSTM2P28161 218 aa0.58□□□□□ -2.32
SNORD28-201ENST00000384706 GABRB3P28472 473 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms