RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PMLP29590 882 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 GARSP41250 739 aaKnown RBP16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 ZNF460Q14592 562 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 GRTP1Q5TC63 336 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 PQLC1Q8N2U9 271 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 NCSTNQ92542 709 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 CELF6Q96J87 481 aaKnown RBP16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 CATSPER2Q96P56 530 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 NMRAL1Q9HBL8 299 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 SLC39A10Q9ULF5 831 aa16.54■□□□□ 0.24
NKX3-1-201ENST00000380871 SRGAP2BP0DMP2 458 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 THPOP40225 353 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 PNPLA4P41247 253 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 MAGEA12P43365 314 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 ACADSBP45954 432 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 MS4A2Q01362 244 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 CCDC153Q494R4 210 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 OGFRL1Q5TC84 451 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 GDF6Q6KF10 455 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 DSELQ8IZU8 1212 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 NPWQ8N729 165 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 PCED1BQ96HM7 432 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 RTKNQ9BST9 563 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 IARS2Q9NSE4 1012 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 APPL1Q9UKG1 709 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 KLHL33A6NCF5 533 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 F8W810 466 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 CASQ2O14958 399 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 ZBTB24O43167 697 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 THP07101 528 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 PABPC4LP0CB38 370 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 PTPN3P26045 913 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 GLUD2P49448 558 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 SLC25A52Q3SY17 297 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 FSCBQ5H9T9 825 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 SPANXN3Q5MJ09 141 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 DNAJC1Q96KC8 554 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 VCX3BQ9H321 246 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 COPS7BQ9H9Q2 264 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 TMEM233B4DJY2 109 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 TRIM13O60858 407 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 ENO3P13929 434 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 CD52P31358 61 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 SPRP35270 261 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 CLEC14AQ86T13 490 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 SPATA24Q86W54 205 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 LILRA2Q8N149 483 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 HSFY1Q96LI6 401 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 CNBD2Q96M20 576 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 ZIC5Q96T25 663 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 C20orf96Q9NUD7 363 aaPredicted RBP16.53■□□□□ 0.24
NKX3-1-201ENST00000380871 SBK3P0C264 359 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 ATP6V1B1P15313 513 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 BDNFP23560 247 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 AXLP30530 894 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 RGS2P41220 211 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 ADAM17P78536 824 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 PDK1Q15118 436 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 ARL13AQ5H913 290 aaPredicted RBP16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 NXNQ6DKJ4 435 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 STRADAQ7RTN6 431 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 GDAP2Q9NXN4 497 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 ZDHHC2Q9UIJ5 367 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 STAP1Q9ULZ2 295 aa16.52■□□□□ 0.24
NKX3-1-201ENST00000380871 DNAJA2O60884 412 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 PIGNO95427 931 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 KCNE1P15382 129 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 GRIA4P48058 902 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 NAGLUP54802 743 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 ZBTB17Q13105 803 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 CEACAM7Q14002 265 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 FLOT2Q14254 428 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 GRM3Q14832 879 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 KDELC2Q7Z4H8 507 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 PTAR1Q7Z6K3 402 aaPredicted RBP16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 ARHGAP18Q8N392 663 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 RNF217Q8TC41 542 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 VPS39Q96JC1 886 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 HAPLN3Q96S86 360 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 MLPHQ9BV36 600 aaPredicted RBP16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 ACE2Q9BYF1 805 aaPredicted RBP16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 LRRC40Q9H9A6 602 aa16.52■□□□□ 0.23
NKX3-1-201ENST00000380871 A0A1B0GTW7 788 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 TOMM70O94826 608 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 NMBRP28336 390 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 CD68P34810 354 aaPredicted RBP16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 MRPS6P82932 125 aaKnown RBP16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 MPP3Q13368 585 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 NAB1Q13506 487 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 RWDD4Q6NW29 188 aaKnown RBP16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 KCNMB4Q86W47 210 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 GALNT4Q8N4A0 578 aa16.51■□□□□ 0.23
NKX3-1-201ENST00000380871 METTL25Q8N6Q8 603 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms