RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TTC39BQ5VTQ0 682 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-203ENST00000380748 ERN2Q76MJ5 926 aaKnown RBP17.75■□□□□ 0.43
HMGN1-203ENST00000380748 C14orf80Q86SX3 495 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 RBFAQ8N0V3 343 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 CHST14Q8NCH0 376 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 OR2A12Q8NGT7 310 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 FAM174AQ8TBP5 190 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 RNF34Q969K3 372 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 TCEAL2Q9H3H9 227 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-203ENST00000380748 EPB41L5Q9HCM4 733 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 DYRK4Q9NR20 520 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 VPS28Q9UK41 221 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 COQ4Q9Y3A0 265 aa17.75■□□□□ 0.43
HMGN1-203ENST00000380748 KCNU1A8MYU2 1149 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 K7ERQ8 282 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 RNF225M0QZC1 329 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 TPP1O14773 563 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 SPINT1O43278 529 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 GCATO75600 419 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 RHOBTB3O94955 611 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 PAK4O96013 591 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 IGLV3-25P01717 112 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 SFTPCP11686 197 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 HGFP14210 728 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 UGT1A5P35504 534 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 INHBCP55103 352 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 CCDC15Q0P6D6 951 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 EIF2B5Q13144 721 aaKnown RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 PDE1CQ14123 709 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 TCERG1LQ5VWI1 586 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 FBXL22Q6P050 247 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 VASH2Q86V25 355 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 FBXO39Q8N4B4 442 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 ATP6V0D2Q8N8Y2 350 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 TMIEQ8NEW7 156 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 WDR48Q8TAF3 677 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 GRIN3AQ8TCU5 1115 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 NAT6Q93015 286 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 INTS4Q96HW7 963 aaKnown RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 SLC17A9Q9BYT1 436 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 SEPT3Q9UH03 358 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 IPO11Q9UI26 975 aaKnown RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 ACSL6Q9UKU0 697 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-203ENST00000380748 PCDHGA4Q9Y5G9 962 aa17.74■□□□□ 0.43
HMGN1-203ENST00000380748 NTN3O00634 580 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 PPFIA2O75334 1257 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 TRUB2O95900 331 aaKnown RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 EPB41P11171 864 aaKnown RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 WT1P19544 449 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 RABIFP47224 123 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 RPIAP49247 311 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 CYP4F2P78329 520 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 C1orf61Q13536 156 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 RAB11FIP2Q7L804 512 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 GUF1Q8N442 669 aaKnown RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 HTR3CQ8WXA8 447 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 PPP1R13BQ96KQ4 1090 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 RPRD1AQ96P16 312 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-203ENST00000380748 HDAC8Q9BY41 377 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 FOXP3Q9BZS1 431 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 ST7Q9NRC1 585 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 HS3ST2Q9Y278 367 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 PCDHB4Q9Y5E5 795 aa17.73■□□□□ 0.43
HMGN1-203ENST00000380748 SCN8AQ9UQD0 1980 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 SNAP91O60641 907 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 PRNPP04156 253 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 LIPCP11150 499 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 CR2P20023 1033 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 RRM1P23921 792 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 TBXAS1P24557 533 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 GGCXP38435 758 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 RPS21P63220 83 aaKnown RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 EIF4EBP2Q13542 120 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 CLCA4Q14CN2 919 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 ARSIQ5FYB1 569 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 BEND5Q7L4P6 421 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 ATP11CQ8NB49 1132 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 GLMNQ92990 594 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 CCDC114Q96M63 670 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 PSMB7Q99436 277 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 SLC25A18Q9H1K4 315 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 SPASTQ9UBP0 616 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 APOBEC3BQ9UH17 382 aaKnown RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 RABGEF1Q9UJ41 708 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 PNMA8BQ9ULN7 279 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-203ENST00000380748 PADI4Q9UM07 663 aa17.72■□□□□ 0.43
HMGN1-203ENST00000380748 SART1O43290 800 aaKnown RBP17.71■□□□□ 0.43
HMGN1-203ENST00000380748 SMAD6O43541 496 aaKnown RBP17.71■□□□□ 0.43
HMGN1-203ENST00000380748 MYL1P05976 194 aa17.71■□□□□ 0.43
HMGN1-203ENST00000380748 PFKFB1P16118 471 aa17.71■□□□□ 0.43
HMGN1-203ENST00000380748 RPL34P49207 117 aaKnown RBP17.71■□□□□ 0.43
HMGN1-203ENST00000380748 EIF3IQ13347 325 aaKnown RBP17.71■□□□□ 0.43
HMGN1-203ENST00000380748 EDRF1Q3B7T1 1238 aa17.71■□□□□ 0.43
HMGN1-203ENST00000380748 PRRT3Q5FWE3 981 aa17.71■□□□□ 0.43
HMGN1-203ENST00000380748 MANEAQ5SRI9 462 aa17.71■□□□□ 0.43
HMGN1-203ENST00000380748 KIAA1161Q6NSJ0 714 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms