RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 NNMTP40261 264 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 NOMO1Q15155 1222 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 E2F5Q15329 346 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 HNRNPA1L2Q32P51 320 aaKnown RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 HSF5Q4G112 596 aaPredicted RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 SDE2Q6IQ49 451 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 FBXL6Q8N531 539 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 TMEM105Q8N8V8 129 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.34
SMN1-202ENST00000380707 MMP17Q9ULZ9 603 aa12.9□□□□□ -0.34
SMN1-202ENST00000380707 CES2O00748 559 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
SMN1-202ENST00000380707 MATN3O15232 486 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 ATG13O75143 517 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 TMCC1O94876 653 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
SMN1-202ENST00000380707 CLCN6P51797 869 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 SLC10A7Q0GE19 358 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 AP1B1Q10567 949 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 CYTH1Q15438 398 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 SIX1Q15475 284 aaPredicted RBP12.89□□□□□ -0.35
SMN1-202ENST00000380707 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 Q6ZVU0 165 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 SPEM1Q8N4L4 309 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 PTPRN2Q92932 1015 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
SMN1-202ENST00000380707 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 TNKS2Q9H2K2 1166 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 TTC7AQ9ULT0 858 aaPredicted RBP12.89□□□□□ -0.35
SMN1-202ENST00000380707 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
SMN1-202ENST00000380707 KCNK1O00180 336 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 GPR37L1O60883 481 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SIN3BO75182 1162 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 HOXB2P14652 356 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 COL9A1P20849 921 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 MAGEA9P43362 315 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 XRCC4Q13426 336 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 CRY1Q16526 586 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TSEN2Q8NCE0 465 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 ACTRT1Q8TDG2 376 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TFB1MQ8WVM0 346 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 CASKIN2Q8WXE0 1202 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 ATG4AQ8WYN0 398 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 MAML1Q92585 1016 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 FATE1Q969F0 183 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 ISG20Q96AZ6 181 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 QKIQ96PU8 341 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMN1-202ENST00000380707 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SUN2Q9UH99 717 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SHROOM3Q8TF72 1996 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 EDDM13A0A1B0GTR0 161 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 H7C0C1 242 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 MUSKO15146 869 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 BNIP3LO60238 219 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 RBP3P10745 1247 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 CCNB1P14635 433 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 ATP5OP48047 213 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SATB1Q01826 763 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 SLC45A4Q5BKX6 768 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TIGD7Q6NT04 549 aaPredicted RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TEX26Q8N6G2 289 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
SMN1-202ENST00000380707 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 TM6SF2Q9BZW4 377 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 LHX3Q9UBR4 397 aa12.88□□□□□ -0.35
SMN1-202ENST00000380707 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms