RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TBC1D13Q9NVG8 400 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 COPG2Q9UBF2 871 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 DNAJC16Q9Y2G8 782 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 KCNU1A8MYU2 1149 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 E9PAM4 449 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 INPPL1O15357 1258 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 CCDC22O60826 627 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PEX11AO75192 247 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 HLA-DQB2P05538 268 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 GABRB3P28472 473 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SPRP35270 261 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 NUMBP49757 651 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 MPP3Q13368 585 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 POU6F1Q14863 301 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 BRMS1LQ5PSV4 323 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 DENND5AQ6IQ26 1287 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF280DQ6N043 979 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC24A5Q71RS6 500 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ISL2Q96A47 359 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 IL12RB2Q99665 862 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ZCWPW1Q9H0M4 648 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 EBF2Q9HAK2 575 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 ACSS2Q9NR19 701 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 PNPOQ9NVS9 261 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
PDLIM5-204ENST00000380176 LAMA2P24043 3122 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 A0A096LPK6 155 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 AOC2O75106 756 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 TBX18O95935 607 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 ENO1P06733 434 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CALB2P22676 271 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 DNAJA1P31689 397 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CYP2C18P33260 490 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CHRNA4P43681 627 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 TUBB3Q13509 450 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 ITGA9Q13797 1035 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PRPSAP1Q14558 356 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 GRM3Q14832 879 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 KRT72Q14CN4 511 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 NOMO2Q5JPE7 1267 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 NAPEPLDQ6IQ20 393 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 NAPRTQ6XQN6 538 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CCDC91Q7Z6B0 441 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 KLHDC8BQ8IXV7 354 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 ATAD1Q8NBU5 361 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 URGCPQ8TCY9 931 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 HLA-CQ95604 372 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 VPS39Q96JC1 886 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 GLOD4Q9HC38 313 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC2A6Q9UGQ3 507 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 GREB1Q4ZG55 1949 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 LAMA3Q16787 3333 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 MAGEB16A2A368 324 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 MATN3O15232 486 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 GYG2O15488 501 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PMPCBO75439 489 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 OAZ2O95190 189 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 C2P06681 752 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 SKIP12755 728 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 EZRP15311 586 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 SAT1P21673 171 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 GATMP50440 423 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PAPOLAP51003 745 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 COG7P83436 770 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 INSCQ1MX18 579 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 VWA5B1Q5TIE3 1220 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 ESRP1Q6NXG1 681 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 TFAP2DQ7Z6R9 452 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CLEC14AQ86T13 490 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 RNF180Q86T96 592 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 DENND6AQ8IWF6 608 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PXYLP1Q8TE99 480 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 RILPQ96NA2 401 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 FCRL5Q96RD9 977 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 TBL1YQ9BQ87 522 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 LBHD1Q9BQE6 289 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 FICDQ9BVA6 458 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 KIFC1Q9BW19 673 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 CCDC106Q9BWC9 280 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 FTHL17Q9BXU8 183 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 WWP1Q9H0M0 922 aa8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 RBM22Q9NW64 420 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDLIM5-204ENST00000380176 PRR5-ARHGAP8B1AHC4 643 aa8.09□□□□□ -1.12
PDLIM5-204ENST00000380176 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.09□□□□□ -1.12
PDLIM5-204ENST00000380176 G3V2L1 256 aa8.09□□□□□ -1.12
PDLIM5-204ENST00000380176 EOMESO95936 686 aa8.09□□□□□ -1.12
PDLIM5-204ENST00000380176 SERPINE1P05121 402 aa8.09□□□□□ -1.12
PDLIM5-204ENST00000380176 RPSAP08865 295 aaKnown RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms