RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 BTBD10Q9BSF8 475 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 TACO1Q9BSH4 297 aaKnown RBP21.9■■□□□ 1.1
TRIM54-202ENST00000380075 ARL8BQ9NVJ2 186 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 DONSONQ9NYP3 566 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 KCNU1A8MYU2 1149 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 FGF3P11487 239 aaPredicted RBP21.9■■□□□ 1.1
TRIM54-202ENST00000380075 GEMP55040 296 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 SLC39A12Q504Y0 691 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 CES4AQ5XG92 561 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 AFMIDQ63HM1 303 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 PTCD2Q8WV60 388 aaKnown RBP21.9■■□□□ 1.1
TRIM54-202ENST00000380075 GLOD4Q9HC38 313 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 FBXO6Q9NRD1 293 aaPredicted RBP21.9■■□□□ 1.1
TRIM54-202ENST00000380075 SORCS3Q9UPU3 1222 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 A8MUI8 341 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 MAFKO60675 156 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 TOP3BO95985 862 aaKnown RBP21.89■■□□□ 1.09
TRIM54-202ENST00000380075 PCLAFQ15004 111 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 FSTL4Q6MZW2 842 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 C16orf46Q6P387 395 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 COLGALT2Q8IYK4 626 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 RTL3Q8N8U3 475 aaKnown RBP21.89■■□□□ 1.09
TRIM54-202ENST00000380075 MFSD3Q96ES6 412 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 YME1L1Q96TA2 773 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 C20orf96Q9NUD7 363 aaPredicted RBP21.89■■□□□ 1.09
TRIM54-202ENST00000380075 COPG2Q9UBF2 871 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 SFMBT1Q9UHJ3 866 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 MID2Q9UJV3 735 aa21.89■■□□□ 1.09
TRIM54-202ENST00000380075 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 SYN3O14994 580 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 TLL1O43897 1013 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 DDHD2O94830 711 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 MYOGP15173 224 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 MAGEA11P43364 429 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 RPL10AP62906 217 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ANO4Q32M45 955 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 HSP90AA5PQ58FG0 334 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 PCID2Q5JVF3 399 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 LCA5Q86VQ0 697 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 SCN4BQ8IWT1 228 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 NUP93Q8N1F7 819 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 FAM13CQ8NE31 585 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 PIWIL2Q8TC59 973 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ZNF689Q96CS4 500 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 CASD1Q96PB1 797 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 RAD9AQ99638 391 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 TBL1YQ9BQ87 522 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 MCMBPQ9BTE3 642 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 EBF2Q9HAK2 575 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 RC3H2Q9HBD1 1191 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 NOP53Q9NZM5 478 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 TLR6Q9Y2C9 796 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 PTPRSQ13332 1948 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 A0A1W2PQH9 124 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 F8W810 466 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ESRRAP11474 423 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 SLC1A6P48664 564 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 AQP5P55064 265 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 IRX4P78413 519 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 HTRA4P83105 476 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ZNF280BQ86YH2 543 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ABI1Q8IZP0 508 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 PPP4R1Q8TF05 950 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 SREK1Q8WXA9 508 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 SLC39A8Q9C0K1 460 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 NMUR2Q9GZQ4 415 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 MRM3Q9HC36 420 aaKnown RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 CHRAC1Q9NRG0 131 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 ABI2Q9NYB9 513 aaPredicted RBP21.88■■□□□ 1.09
TRIM54-202ENST00000380075 IL1RAPL1Q9NZN1 696 aa21.88■■□□□ 1.09
TRIM54-202ENST00000380075 TBKBP1A7MCY6 615 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 E9PAM4 449 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 PRKCGP05129 697 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 PBX2P40425 430 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 TUBP50607 506 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 POTEHQ6S545 545 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 OTOP3Q7RTS5 596 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 FATE1Q969F0 183 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 FAM193BQ96PV7 902 aaPredicted RBP21.87■■□□□ 1.09
TRIM54-202ENST00000380075 C20orf27Q9GZN8 174 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 MMADHCQ9H3L0 296 aaPredicted RBP21.87■■□□□ 1.09
TRIM54-202ENST00000380075 NMUR1Q9HB89 426 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 ENTPD7Q9NQZ7 604 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 TBC1D13Q9NVG8 400 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 TMEM216Q9P0N5 145 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 INSL6Q9Y581 213 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 LCHNA4D1U4 455 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 MSI1O43347 362 aaKnown RBP21.87■■□□□ 1.09
TRIM54-202ENST00000380075 HOXA2O43364 376 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 APOA4P06727 396 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 DNAJB1P25685 340 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 POLD2P49005 469 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 MLLT6P55198 1093 aaPredicted RBP21.87■■□□□ 1.09
TRIM54-202ENST00000380075 E2F5Q15329 346 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 UGP2Q16851 508 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 ARTNQ5T4W7 220 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 PKN3Q6P5Z2 889 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 ZCCHC23Q6ZST2 131 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 CLEC14AQ86T13 490 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms