RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
NEDD9-202ENST00000379446 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
NEDD9-202ENST00000379446 PCDHGB4Q9UN71 923 aa6.66□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM33Q9UPN9 1127 aa6.66□□□□□ -1.34
NEDD9-202ENST00000379446 ALG6Q9Y672 507 aa6.66□□□□□ -1.34
NEDD9-202ENST00000379446 H3BNC9 293 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 MSI1O43347 362 aaKnown RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 DGKIO75912 1065 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CHRNA1P02708 482 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 APOA4P06727 396 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 HSPA9P38646 679 aaKnown RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 SEPHS1P49903 392 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 SLC5A3P53794 718 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 SPRED3Q2MJR0 410 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ASTE1Q2TB18 679 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF542PQ5EBM4 170 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CCDC137Q6PK04 289 aaKnown RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 IQCKQ8N0W5 287 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 FBXO25Q8TCJ0 367 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 NCSTNQ92542 709 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 AGPAT1Q99943 283 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ZDHHC7Q9NXF8 308 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 APEX2Q9UBZ4 518 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ERVK-11Q9UQG0 969 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 DMTF1Q9Y222 760 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 C15orf41Q9Y2V0 281 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 PRKAB1Q9Y478 270 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ROBO3Q96MS0 1386 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 F8VZ95 297 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CYP7B1O75881 506 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 UBOX5O94941 541 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 LCA5LO95447 670 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 RPN2P04844 631 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 PABPC1P11940 636 aaKnown RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 IRS1P35568 1242 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CAPZA2P47755 286 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 MASP1P48740 699 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ERVFC1P60507 584 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 SKOR1P84550 965 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 PDE1CQ14123 709 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 SLC29A2Q14542 456 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CBWD6Q4V339 395 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CBWD3Q5JTY5 395 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CBWD5Q5RIA9 395 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 FAM109BQ6ICB4 259 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 PKN3Q6P5Z2 889 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 PDIK1LQ8N165 341 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 TRPV1Q8NER1 839 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 MORC4Q8TE76 937 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 NXPE3Q969Y0 559 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 ASB2Q96Q27 587 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 DPYSL5Q9BPU6 564 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CARS2Q9HA77 564 aaKnown RBP6.65□□□□□ -1.34
NEDD9-202ENST00000379446 CYLDQ9NQC7 956 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 NKIRAS1Q9NYS0 192 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 RAD54BQ9Y620 910 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 MYH3P11055 1940 aa6.65□□□□□ -1.34
NEDD9-202ENST00000379446 STRCQ7RTU9 1775 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 TIAM2Q8IVF5 1701 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 TTLL8A6PVC2 850 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 SUN1O94901 812 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 ECEL1O95672 775 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 TYRP14679 529 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 BRAFP15056 766 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 DRD1P21728 446 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 IDSP22304 550 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 LILRA4P59901 499 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 MBLAC2Q68D91 279 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-202ENST00000379446 TTC13Q8NBP0 860 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 LNX1Q8TBB1 728 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-202ENST00000379446 KAT5Q92993 513 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 MR1Q95460 341 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 SMC6Q96SB8 1091 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 SH3GL2Q99962 352 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 PDZD7Q9H5P4 517 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 KCNK12Q9HB15 430 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 CDHR5Q9HBB8 845 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 USP29Q9HBJ7 922 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 POPDC2Q9HBU9 364 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 FGFR1OP2Q9NVK5 253 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 SELENONQ9NZV5 590 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 SPASTQ9UBP0 616 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 TTC7AQ9ULT0 858 aaPredicted RBP6.65□□□□□ -1.35
NEDD9-202ENST00000379446 ASTN1O14525 1302 aa6.65□□□□□ -1.35
NEDD9-202ENST00000379446 WDR91A4D1P6 747 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 FAM227AF5H4B4 570 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 POC1B-GALNT4F8VUJ3 575 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SLC16A3O15427 465 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 KCNN4O15554 427 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 NBNO60934 754 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ADAMTS4O75173 837 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ZCCHC18P0CG32 403 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ALOX15P16050 662 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 COMTP21964 271 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RRM1P23921 792 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 NTSR1P30989 418 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SERPINB4P48594 390 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms