RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FAM170AA1A519 330 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 PMS2P1A4D2B8 440 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 CYSRT1A8MQ03 144 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 SCAMP1O15126 338 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 PMM2O15305 246 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 P4HA2O15460 535 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 SMAD6O43541 496 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 DXOO77932 396 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 PRNPP04156 253 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 GP1BAP07359 652 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 RECQLP46063 649 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 VASPP50552 380 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 DNA2P51530 1060 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 CDH4P55283 916 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 HNRNPKP61978 463 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 EIF4EBP2Q13542 120 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 DRAP1Q14919 205 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 ISXQ2M1V0 245 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 DEFB133Q30KQ1 61 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 ALFQ53S48 1182 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 NEK5Q6P3R8 708 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 GUSBP11Q6P575 273 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 GJB7Q6PEY0 223 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 FAM183BPQ6ZVS7 135 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 TFAP2DQ7Z6R9 452 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 NELFBQ8WX92 580 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 SLC2A13Q96QE2 648 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 CPXM1Q96SM3 734 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 C2orf49Q9BVC5 232 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 DUSP23Q9BVJ7 150 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 IL36AQ9UHA7 158 aa18.19■□□□□ 0.5
PDLIM4-202ENST00000379018 POM121BA6NF01 834 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 M0QYT0 321 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 SLC28A2O43868 658 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 HSF2BPO75031 334 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 LEFTY1O75610 366 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 STX17P56962 302 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 FZD2Q14332 565 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 ARHGAP44Q17R89 818 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 ABI3BPQ7Z7G0 1075 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 TMIEQ8NEW7 156 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 LMX1AQ8TE12 382 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 DHTKD1Q96HY7 919 aaPredicted RBP18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 PPP1R16AQ96I34 528 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 PPP1R13BQ96KQ4 1090 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 HS3ST2Q9Y278 367 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 RP1P56715 2156 aa18.18■□□□□ 0.5
PDLIM4-202ENST00000379018 A0A0D9SEW6 157 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 A0A1W2PNU3 283 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 H3BM21 787 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 MUSKO15146 869 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 RAD51BO15315 384 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 PAK4O96013 591 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 C6P13671 934 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 PDE1CQ14123 709 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 FGL2Q14314 439 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 EFHC1Q5JVL4 640 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 ZCCHC8Q6NZY4 707 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 DPY19L3Q6ZPD9 716 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 PARGQ86W56 976 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 CREBRFQ8IUR6 639 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 C1orf131Q8NDD1 294 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 TTC9Q92623 222 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 BMFQ96LC9 184 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 SPON2Q9BUD6 331 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 SLC17A9Q9BYT1 436 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 DPH1Q9BZG8 443 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 SYNCQ9H7C4 482 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 MPP6Q9NZW5 540 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 MAN1B1Q9UKM7 699 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 CNTN6Q9UQ52 1028 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 TBC1D30Q9Y2I9 924 aa18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDLIM4-202ENST00000379018 MYO18BQ8IUG5 2567 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 B8ZZF3 427 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 CASC3O15234 703 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 DAB1O75553 588 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 ERBB2P04626 1255 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 JUNDP17535 347 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 NEK3P51956 506 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 RNASE9P60153 205 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 TMEM259Q4ZIN3 620 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 TTI2Q6NXR4 508 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 KYAT3Q6YP21 454 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 C11orf57Q6ZUT1 292 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 PRICKLE2Q7Z3G6 844 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 OR7D4Q8NG98 312 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 WBP1Q96G27 269 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 TKTL2Q9H0I9 626 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 CLMPQ9H6B4 373 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 USP29Q9HBJ7 922 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 PIGVQ9NUD9 493 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 KLF15Q9UIH9 416 aa18.16■□□□□ 0.5
PDLIM4-202ENST00000379018 ENTPD2Q9Y5L3 495 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms