RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SKAP2O75563 359 aaPredicted RBP19.76■□□□□ 0.75
SSU72-204ENST00000378726 CBX6O95503 412 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 KRT4P19013 534 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 CA8P35219 290 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 HARS2P49590 506 aaKnown RBP19.76■□□□□ 0.75
SSU72-204ENST00000378726 HHATQ5VTY9 493 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 LVRNQ6Q4G3 990 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 CYS1Q717R9 158 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 OTOAQ7RTW8 1153 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 LONP2Q86WA8 852 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 FIBCD1Q8N539 461 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 MYEOVQ96EZ4 313 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 HMCESQ96FZ2 354 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 TRMT2BQ96GJ1 504 aaKnown RBP19.76■□□□□ 0.75
SSU72-204ENST00000378726 ZNF419Q96HQ0 510 aaPredicted RBP19.76■□□□□ 0.75
SSU72-204ENST00000378726 ZBED2Q9BTP6 218 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 GLOD4Q9HC38 313 aa19.76■□□□□ 0.75
SSU72-204ENST00000378726 LAMA2P24043 3122 aaKnown RBP19.75■□□□□ 0.75
SSU72-204ENST00000378726 PSMD3O43242 534 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 ACSL4O60488 711 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 DCTN3O75935 186 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 FAM155BO75949 473 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 SPATA31D3P0C874 917 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 PGAM1P18669 254 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 STEAP4Q687X5 459 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 SPATA31D4Q6ZUB0 917 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 CIR1Q86X95 450 aaPredicted RBP19.75■□□□□ 0.75
SSU72-204ENST00000378726 FAM13CQ8NE31 585 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 SPATA22Q8NHS9 363 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 ZNF75CPQ92670 426 aaPredicted RBP19.75■□□□□ 0.75
SSU72-204ENST00000378726 FCRL5Q96RD9 977 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 APOL2Q9BQE5 337 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 RNF38Q9H0F5 515 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 LRRC40Q9H9A6 602 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.75■□□□□ 0.751e-10■■□□□ 13.4
SSU72-204ENST00000378726 GKN1Q9NS71 199 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 BFARQ9NZS9 450 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 AAR2Q9Y312 384 aaKnown RBP19.75■□□□□ 0.75
SSU72-204ENST00000378726 FAM159BA6NKW6 160 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 PEX11AO75192 247 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 NEBLO76041 1014 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 GM2AP17900 193 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 GNAZP19086 355 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 ALDH3A1P30838 453 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 EPHB3P54753 998 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 ANO4Q32M45 955 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 LGI2Q8N0V4 545 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 INPP5DQ92835 1189 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 BADQ92934 168 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 TBC1D10AQ9BXI6 508 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 ZNF212Q9UDV6 495 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 PRKAG2Q9UGJ0 569 aa19.75■□□□□ 0.75
SSU72-204ENST00000378726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 F5H5T6 163 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 J3KR12 359 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 ALDH1A2O94788 518 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 MT-ND3P03897 115 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 OR1E1P30953 314 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 SLC11A2P49281 568 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 SATB1Q01826 763 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 PPIGQ13427 754 aaKnown RBP eCLIP19.74■□□□□ 0.75
SSU72-204ENST00000378726 TAF1BQ53T94 588 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 ZNF354CQ86Y25 554 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 UNC5BQ8IZJ1 945 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 INSL5Q9Y5Q6 135 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 NUMBLQ9Y6R0 609 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 UGT1A9O60656 530 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 MT-CYBP00156 380 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 HLA-DQB2P05538 268 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 POLBP06746 335 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 HTRA4P83105 476 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 HNRNPDQ14103 355 aaKnown RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 POLD3Q15054 466 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 TTC39BQ5VTQ0 682 aaPredicted RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 NAPEPLDQ6IQ20 393 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 RFWD3Q6PCD5 774 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 DENND1CQ8IV53 801 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 GPR65Q8IYL9 337 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 CFAP52Q8N1V2 620 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 TTC17Q96AE7 1141 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 C12orf65Q9H3J6 166 aaKnown RBP19.74■□□□□ 0.75
SSU72-204ENST00000378726 RNPEPL1Q9HAU8 725 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 UGT1A7Q9HAW7 530 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 UGT1A10Q9HAW8 530 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 UGT1A8Q9HAW9 530 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 ZNF180Q9UJW8 692 aa19.74■□□□□ 0.75
SSU72-204ENST00000378726 WDR91A4D1P6 747 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 C2orf78A6NCI8 922 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 RAMP2O60895 175 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 ANXA9O76027 345 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 PEX11BO96011 259 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 CNPP09543 421 aaKnown RBP19.73■□□□□ 0.75
SSU72-204ENST00000378726 CTSAP10619 480 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 EN2P19622 333 aaPredicted RBP19.73■□□□□ 0.75
SSU72-204ENST00000378726 SLC6A4P31645 630 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 PPP3CCP48454 512 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 NPY2RP49146 381 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 RENBPP51606 427 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 CERCAMQ5T4B2 595 aa19.73■□□□□ 0.75
SSU72-204ENST00000378726 LGSNQ5TDP6 509 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms