RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ZNF284Q2VY69 593 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 DNAL1Q4LDG9 190 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 SEL1L3Q68CR1 1132 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 NCLNQ969V3 563 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 PIWIL1Q96J94 861 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.113e-9■■□□□ 12
SHROOM1-203ENST00000378679 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FAM53CQ9NYF3 392 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 WWOXQ9NZC7 414 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 RAD54BQ9Y620 910 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FAM95CA0A1B0GW59 222 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FOXO6A8MYZ6 492 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 IGSF6O95976 241 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 LRPAP1P30533 357 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 CTBP1Q13363 440 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 LAYNQ6UX15 382 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 WDTC1Q8N5D0 677 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 DNAJC9Q8WXX5 260 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 TUBGCP3Q96CW5 907 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 VCX3AQ9NNX9 186 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 TAS2R13Q9NYV9 303 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FZD10Q9ULW2 581 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 EFCAB14O75071 495 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF567Q8N184 647 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 SMG8Q8ND04 991 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 SLCO1B3Q9NPD5 702 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 CASS4Q9NQ75 786 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FBXO5Q9UKT4 447 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 GON4LQ3T8J9 2241 aa14.39□□□□□ -0.11
SHROOM1-203ENST00000378679 C5orf60A6NFR6 353 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 E9PBE3 544 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 KLHL41O60662 606 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 GLUD1P00367 558 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CCND1P24385 295 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CRABP2P29373 138 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 ELF3P78545 371 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 BTKQ06187 659 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 NAB1Q13506 487 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SMOQ99835 787 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CRTAC1Q9NQ79 661 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 FBXO6Q9NRD1 293 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 THAP1Q9NVV9 213 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 KPNA3O00505 521 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CDH5P33151 784 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CDK18Q07002 472 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 RASA2Q15283 850 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SDE2Q6IQ49 451 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 KYAT3Q6YP21 454 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 MRPL40Q9NQ50 206 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 ZDHHC18Q9NUE0 388 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 TRPC5OSA6NMA1 111 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 MYO1DO94832 1006 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 FGBP02675 491 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 ITGA2BP08514 1039 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 RHOQP17081 205 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CORO1AP31146 461 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SCNN1AP37088 669 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 NAGLUP54802 743 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 AP2B1P63010 937 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CCDC153Q494R4 210 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 PREPLQ4J6C6 727 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 LRRC8EQ6NSJ5 796 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SZRD1Q7Z422 152 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 RBM23Q86U06 439 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 CENPTQ96BT3 561 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 TPBGLP0DKB5 382 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 TPSB2P20231 275 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC1A6P48664 564 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 TPSAB1Q15661 275 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 POTEHQ6S545 545 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 BATF3Q9NR55 127 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 IL1RAPL1Q9NZN1 696 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 PCDHB9Q9Y5E1 797 aa14.38□□□□□ -0.11
SHROOM1-203ENST00000378679 MBLAC1A4D2B0 266 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 A8MUI8 341 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 DNM1LO00429 736 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 IRAK2O43187 625 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 TMEM63AO94886 807 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CYBAP13498 195 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ABL2P42684 1182 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CACUL1Q86Y37 369 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 MYO1HQ8N1T3 1032 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SNX31Q8N9S9 440 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 HJURPQ8NCD3 748 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms