RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GAL3ST1Q99999 423 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ROPN1BQ9BZX4 212 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 BRINP2Q9C0B6 783 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ROPN1Q9HAT0 212 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 MARK1Q9P0L2 795 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 AP4S1Q9Y587 144 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 A0A088AWK7 358 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ZNF10P21506 573 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 SERPINA4P29622 427 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ELK3P41970 407 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 POU5F1Q01860 360 aaKnown RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 METTL7BQ6UX53 244 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ADGRG6Q86SQ4 1221 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 ZNF483Q8TF39 744 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 ANKS1AQ92625 1134 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 CENPIQ92674 756 aaPredicted RBP16.52■□□□□ 0.24
RGP1-201ENST00000378078 MARCH2Q9P0N8 246 aa16.52■□□□□ 0.24
RGP1-201ENST00000378078 TRIM64A6NGJ6 449 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 CACNA2D1P54289 1103 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 MOB2Q70IA6 237 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 DHFR2Q86XF0 187 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 RIBC1Q8N443 379 aaPredicted RBP16.52■□□□□ 0.23
RGP1-201ENST00000378078 TRPV3Q8NET8 790 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.23
RGP1-201ENST00000378078 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 PTGFRNQ9P2B2 879 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 KPNA5O15131 536 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 IFNGR2P38484 337 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 ARF3P61204 181 aaPredicted RBP16.52■□□□□ 0.23
RGP1-201ENST00000378078 ARF1P84077 181 aaKnown RBP16.52■□□□□ 0.23
RGP1-201ENST00000378078 SPIBQ01892 262 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 LRRC49Q8IUZ0 686 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 GHDCQ8N2G8 530 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 NKD1Q969G9 470 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 PHF11Q9UIL8 331 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 ZNF780BQ9Y6R6 833 aa16.52■□□□□ 0.23
RGP1-201ENST00000378078 NOS1APO75052 506 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 RARGP13631 454 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 IGFALSP35858 605 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 TAS2R41P59536 307 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 VPS72Q15906 364 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 CHERPQ8IWX8 916 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 CRISPLD1Q9H336 500 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 GJB1P08034 283 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 PSMB4P28070 264 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 IL12RB1P42701 662 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 POLR2LP62875 67 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 RGS1Q08116 209 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 OR2L5Q8NG80 312 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 ZSCAN5DPP0CG00 497 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 NT5C2P49902 561 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 TARBP2Q15633 366 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 AGBL3Q8NEM8 1001 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 MAGEE2Q8TD90 523 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 KLK6Q92876 244 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 ULBP1Q9BZM6 244 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 PAIP1Q9H074 479 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 CMTM6Q9NX76 183 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 CROTQ9UKG9 612 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 INMTO95050 263 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 SBK1Q52WX2 424 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 TC2NQ8N9U0 490 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 FAM126AQ9BYI3 521 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 FOXP2O15409 715 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 PLOD3O60568 738 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 PEX11AO75192 247 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 LINC00032P0C843 101 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 AKR1A1P14550 325 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 WARSP23381 471 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 CCT3P49368 545 aaKnown RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 GALK1P51570 392 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 CCZ1BP86790 482 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 FOXM1Q08050 763 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 MAPK7Q13164 816 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 FIBCD1Q8N539 461 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 ZNF276Q8N554 614 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 BHLHE22Q8NFJ8 381 aaPredicted RBP16.51■□□□□ 0.23
RGP1-201ENST00000378078 IQCF5A8MTL0 148 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 TISP43B9A030 160 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 NTSR2O95665 410 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 MAGEC3Q8TD91 643 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 TTLL2Q9BWV7 592 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 BRD9Q9H8M2 597 aa16.51■□□□□ 0.23
RGP1-201ENST00000378078 JCADQ9P266 1359 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
RGP1-201ENST00000378078 ASNA1O43681 348 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 MGRN1O60291 552 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 TNFRSF21O75509 655 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 BCL10O95999 233 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 HSPA13P48723 471 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 HTR3CQ8WXA8 447 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 CLCC1Q96S66 551 aa16.5■□□□□ 0.23
RGP1-201ENST00000378078 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms