RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SLC11A2	P49281	568 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	ARPC4	P59998	168 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	CRADD	P78560	199 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	IFI35	P80217	286 aa	Predicted RBP	11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	LRP8	Q14114	963 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	PAFAH1B3	Q15102	231 aa	Known RBP	11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	TRIP4	Q15650	581 aa	Predicted RBP	11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	CCDC6	Q16204	474 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	MSS51	Q4VC12	460 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	FOXB2	Q5VYV0	432 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	TPGS2	Q68CL5	300 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	C16orf59	Q7L2K0	433 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	CROCCP2	Q86T23	111 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF567	Q8N184	647 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	SCML4	Q8N228	414 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF689	Q96CS4	500 aa	Predicted RBP	11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	VWCE	Q96DN2	955 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	BTN2A3P	Q96KV6	586 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	CYP2S1	Q96SQ9	504 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	INIP	Q9NRY2	104 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	NUP205	Q92621	2012 aa		11.9	□□□□□ -0.51
LMO7-204	ENST00000377499	TRIM64C	A6NLI5	447 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	TP73	O15350	636 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	TIMM44	O43615	452 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	VNN2	O95498	520 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	CNP	P09543	421 aa	Known RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	MLLT6	P55198	1093 aa	Predicted RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	SH2D4B	Q5SQS7	431 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	DUS1L	Q6P1R4	473 aa	Known RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	SLC2A7	Q6PXP3	512 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	SRRM1	Q8IYB3	904 aa	Known RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	PDZD8	Q8NEN9	1154 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	ZYG11B	Q9C0D3	744 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	ECT2	Q9H8V3	914 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	SAMD15	Q9P1V8	674 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	HTR3E	A5X5Y0	456 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	FOXO6	A8MYZ6	492 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499		H0YGN5	161 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	CHAD	O15335	359 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	FGF10	O15520	208 aa	Predicted RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	OPHN1	O60890	802 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	TROVE2	P10155	538 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	GJA1	P17302	382 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	GARS	P41250	739 aa	Known RBP	11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	GRIA1	P42261	906 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	IFNAR2	P48551	515 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	PIK3R6	Q5UE93	754 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	ARHGAP36	Q6ZRI8	547 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	SERPINB12	Q96P63	405 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	GCNA	Q96QF7	691 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	ATXN3L	Q9H3M9	355 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	CROT	Q9UKG9	612 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	NFS1	Q9Y697	457 aa		11.89	□□□□□ -0.51
LMO7-204	ENST00000377499	LCHN	A4D1U4	455 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	C5orf60	A6NFR6	353 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ZBTB24	O43167	697 aa	Predicted RBP	11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ATP9B	O43861	1147 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	TBC1D4	O60343	1298 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	GCAT	O75600	419 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	CNTN5	O94779	1100 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	NUDT17	P0C025	328 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	GABRR2	P28476	465 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF135	P52742	658 aa	Predicted RBP	11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	STAT4	Q14765	748 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	MS4A13	Q5J8X5	152 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ITPRIPL1	Q6GPH6	555 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF554	Q86TJ5	538 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	HERC6	Q8IVU3	1022 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	PEX5L	Q8IYB4	626 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ARHGEF2	Q92974	986 aa	Known RBP	11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	PHF12	Q96QT6	1004 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	TXLNGY	Q9BZA5	131 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	SLC39A8	Q9C0K1	460 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	NDFIP2	Q9NV92	336 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.88	□□□□□ -0.51	3e-7	■■■■■ 44.3
LMO7-204	ENST00000377499	INSL5	Q9Y5Q6	135 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	UBOX5	O94941	541 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ADH1A	P07327	375 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	HDC	P19113	662 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	NFKB1	P19838	968 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ATP5D	P30049	168 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	FDFT1	P37268	417 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	MSH2	P43246	934 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	HCAR3	P49019	387 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	PCSK7	Q16549	785 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	IL31	Q6EBC2	164 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	FBXL22	Q6P050	247 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	C4orf22	Q6V702	233 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	BEND5	Q7L4P6	421 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	TAOK1	Q7L7X3	1001 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	RBM23	Q86U06	439 aa	Known RBP	11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	ITIH5	Q86UX2	942 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	MRPS31	Q92665	395 aa	Known RBP	11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	RAD9A	Q99638	391 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	HERC2P3	Q9BVR0	1158 aa		11.88	□□□□□ -0.51
LMO7-204	ENST00000377499	MLXIPL	Q9NP71	852 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms