RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 MRNIPQ6NTE8 343 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 NIPAL1Q6NVV3 410 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ZPBP2Q6X784 338 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 OR5B17Q8NGF7 314 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CENPNQ96H22 339 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 PRR11Q96HE9 360 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF670Q9BS34 389 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ROGDIQ9GZN7 287 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 FANCEQ9HB96 536 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 MOV10Q9HCE1 1003 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CASS4Q9NQ75 786 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DDX43Q9NXZ2 648 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CDH9Q9ULB4 789 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 RNF112Q9ULX5 631 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 EIF3LQ9Y262 564 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ERI2A8K979 691 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 PMM2O15305 246 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ZSCAN9O15535 394 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SUPT20HL2P0C7V6 817 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CSH1P0DML2 217 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CSH2P0DML3 217 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TPSB2P20231 275 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SLC7A1P30825 629 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 RPS9P46781 194 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SLC6A3Q01959 620 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TPSAB1Q15661 275 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DDR2Q16832 855 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SUPT20HL1Q3ZLR7 823 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 CCNYL2Q5T2Q4 361 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 IL23RQ5VWK5 629 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF470Q6ECI4 717 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TMEM53Q6P2H8 277 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TRMT10BQ6PF06 316 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SPPL2CQ8IUH8 684 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TMEM126BQ8IUX1 230 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ADHFE1Q8IWW8 467 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 OFCC1Q8IZS5 231 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 MCFD2Q8NI22 146 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 PABPC5Q96DU9 382 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ZDHHC15Q96MV8 337 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 SPATA33Q96N06 139 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 ASB2Q96Q27 587 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 IL22Q9GZX6 179 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 VTA1Q9NP79 307 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 FAIMQ9NVQ4 179 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DDIT4Q9NX09 232 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DPP3Q9NY33 737 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
CRNKL1-201ENST00000377327 DENRO43583 198 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TSC22D2O75157 780 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ATG7O95352 703 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 MLNP12872 115 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 NCAM1P13591 858 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 KRT6CP48668 564 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 NDST1P52848 882 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 MSS51Q4VC12 460 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PPM1LQ5SGD2 360 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TMEM110Q86TL2 294 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 FAM136AQ96C01 138 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TEX13BQ9BXU2 312 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 RIBC2Q9H4K1 309 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 RPRD1BQ9NQG5 326 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PADI4Q9UM07 663 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PCDHGB4Q9UN71 923 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 MYPNQ86TC9 1320 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TCRBV7S3A2A0A539 114 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 STX7O15400 261 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 DNAJA2O60884 412 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TSPAN9O75954 239 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF682O95780 498 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 NR4A1P22736 598 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 HALP42357 657 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 CLCN2P51788 898 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF235Q14590 738 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 MAPRE1Q15691 268 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PTPN20Q4JDL3 420 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZC3H12BQ5HYM0 836 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 CEP78Q5JTW2 689 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 THAP5Q7Z6K1 395 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 LUZP2Q86TE4 346 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZDHHC17Q8IUH5 632 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 STX19Q8N4C7 294 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 PLD5Q8N7P1 536 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 UBASH3BQ8TF42 649 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 MRPL57Q9BQC6 102 aaKnown RBP9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 TRIM62Q9BVG3 475 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 CCDC106Q9BWC9 280 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 EPB41L1Q9H4G0 881 aa9.17□□□□□ -0.94
CRNKL1-201ENST00000377327 ZNF696Q9H7X3 374 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms