RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
USP11-204ENST00000377107 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
USP11-204ENST00000377107 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 FAM95CA0A1B0GW59 222 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 A6NHS1 94 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 AURKAO14965 403 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 ALDH1A2O94788 518 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 CELF2O95319 508 aaKnown RBP13.13□□□□□ -0.31
USP11-204ENST00000377107 STMN1P16949 149 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 AOC1P19801 751 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 ITGA7Q13683 1181 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 ANO4Q32M45 955 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 STEAP4Q687X5 459 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 SEMA6AQ9H2E6 1030 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 FAM105AQ9NUU6 356 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 APPL1Q9UKG1 709 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 CDYLQ9Y232 598 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 C9IYK1 514 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 HDCP19113 662 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 FGFR3P22607 806 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 THPOP40225 353 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PSEN1P49768 467 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 GJA9P57773 515 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 ZMIZ2Q8NF64 920 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 ANKRD27Q96NW4 1050 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 KLHL4Q9C0H6 718 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CCDC167Q9P0B6 97 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CRYL1Q9Y2S2 319 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CPOXP36551 454 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 DLG1Q12959 904 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CYP2R1Q6VVX0 501 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 MYLK4Q86YV6 388 aaPredicted RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CNTD1Q8N815 330 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PPHLN1Q8NEY8 458 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 DQX1Q8TE96 717 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 IL22Q9GZX6 179 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 GBA3Q9H227 469 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 ARHGEF38Q9NXL2 777 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 TTC3P53804 2025 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 F8W8V4 182 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PEX1O43933 1283 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 FKBP6O75344 327 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CSPG5O95196 566 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 CCNIQ14094 377 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 RAB3IL1Q8TBN0 382 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
USP11-204ENST00000377107 POMKQ9H5K3 350 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 ANKRD12Q6UB98 2062 aa13.12□□□□□ -0.31
USP11-204ENST00000377107 PRKCGP05129 697 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 MPOP05164 745 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 TUBB3Q13509 450 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 KYQ8NBH2 561 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 FCRL2Q96LA5 508 aaPredicted RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 PARP14Q460N5 1801 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 ARL5CA6NH57 179 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 G3V2L1 256 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 HDAC3O15379 428 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 PAGE1O75459 146 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 DDHD2O94830 711 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 F2P00734 622 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 PCSK1P29120 753 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 CD52P31358 61 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 TAS2R39P59534 338 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 CYTH1Q15438 398 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 GK5Q6ZS86 529 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 CEP97Q8IW35 865 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 ST13P4Q8IZP2 240 aaPredicted RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 BHLHE22Q8NFJ8 381 aaPredicted RBP13.11□□□□□ -0.31
USP11-204ENST00000377107 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
USP11-204ENST00000377107 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms