RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 PXNP49023 591 aaPredicted RBP20.27■□□□□ 0.84
DDR1-228ENST00000376575 FNTBP49356 437 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 PTPN5P54829 565 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 ELAVL3Q14576 367 aaKnown RBP20.27■□□□□ 0.84
DDR1-228ENST00000376575 MEI1Q5TIA1 1274 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 DCAF12L1Q5VU92 463 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 TRIM58Q8NG06 486 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 HMGB4Q8WW32 186 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 FATE1Q969F0 183 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 ZNF599Q96NL3 588 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 OLFM3Q96PB7 478 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 TSGA13Q96PP4 275 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 MAK16Q9BXY0 300 aaKnown RBP20.27■□□□□ 0.84
DDR1-228ENST00000376575 IRF2BPLQ9H1B7 796 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 FCF1Q9Y324 198 aaKnown RBP20.27■□□□□ 0.84
DDR1-228ENST00000376575 HCN4Q9Y3Q4 1203 aa20.27■□□□□ 0.84
DDR1-228ENST00000376575 APOL1O14791 398 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 TMCC1O94876 653 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 PYGMP11217 842 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 KRT10P13645 584 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 GARSP41250 739 aaKnown RBP20.26■□□□□ 0.83
DDR1-228ENST00000376575 RPS14P62263 151 aaKnown RBP20.26■□□□□ 0.83
DDR1-228ENST00000376575 ZBTB16Q05516 673 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 TFDP2Q14188 446 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 RFTN1Q14699 578 aaPredicted RBP20.26■□□□□ 0.83
DDR1-228ENST00000376575 CYTH1Q15438 398 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 ACCSLQ4AC99 568 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 ODF2Q5BJF6 829 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 Q6ZVU0 165 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 UBL4BQ8N7F7 174 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 ALS2CR12Q96Q35 445 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 HERPUD2Q9BSE4 406 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 SLC6A17Q9H1V8 727 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 USP36Q9P275 1121 aaKnown RBP20.26■□□□□ 0.83
DDR1-228ENST00000376575 UBA2Q9UBT2 640 aaPredicted RBP20.26■□□□□ 0.83
DDR1-228ENST00000376575 PPM1HQ9ULR3 514 aa20.26■□□□□ 0.83
DDR1-228ENST00000376575 CST8O60676 142 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 GSRP00390 522 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 CNR2P34972 360 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 NR2C2P49116 596 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 MAP7D1Q3KQU3 841 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 LEKR1Q6ZMV7 388 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 ZNF354CQ86Y25 554 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 RFX6Q8HWS3 928 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 STK40Q8N2I9 435 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.25■□□□□ 0.83
DDR1-228ENST00000376575 HDAC11Q96DB2 347 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 ERLEC1Q96DZ1 483 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 ITM2CQ9NQX7 267 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 KCND1Q9NSA2 647 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 SHROOM3Q8TF72 1996 aa20.25■□□□□ 0.83
DDR1-228ENST00000376575 CTSLP07711 333 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 MX2P20592 715 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 TGM2P21980 687 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 CCNCP24863 283 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 ZNF33AQ06730 810 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 CARD16Q5EG05 197 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 ZNF776Q68DI1 518 aaPredicted RBP20.24■□□□□ 0.83
DDR1-228ENST00000376575 HEATR6Q6AI08 1181 aaKnown RBP20.24■□□□□ 0.83
DDR1-228ENST00000376575 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 BBS12Q6ZW61 710 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 ATPAF2Q8N5M1 289 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 TEX26Q8N6G2 289 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 MAML1Q92585 1016 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 FAM131CQ96AQ9 280 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 SIPA1Q96FS4 1042 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 OSBPL8Q9BZF1 889 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 TNKS2Q9H2K2 1166 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 SP110Q9HB58 689 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 LHX3Q9UBR4 397 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 SCML1Q9UN30 329 aa20.24■□□□□ 0.83
DDR1-228ENST00000376575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDR1-228ENST00000376575 ZBTB24O43167 697 aaPredicted RBP20.23■□□□□ 0.83
DDR1-228ENST00000376575 HRO43593 1189 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 MAP3K6O95382 1288 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 P2RY2P41231 377 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 PPIDQ08752 370 aaKnown RBP20.23■□□□□ 0.83
DDR1-228ENST00000376575 TMCO4Q5TGY1 634 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 AADACL2Q6P093 401 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 CCDC50Q8IVM0 306 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 TMIEQ8NEW7 156 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 OR2AP1Q8NGE2 309 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 OR8D1Q8WZ84 308 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 PRCCQ92733 491 aaPredicted RBP20.23■□□□□ 0.83
DDR1-228ENST00000376575 ZNF419Q96HQ0 510 aaPredicted RBP20.23■□□□□ 0.83
DDR1-228ENST00000376575 PSKH2Q96QS6 385 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 TLR10Q9BXR5 811 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 TPSD1Q9BZJ3 242 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDR1-228ENST00000376575 SARDHQ9UL12 918 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 WASF2Q9Y6W5 498 aa20.23■□□□□ 0.83
DDR1-228ENST00000376575 USP27XA6NNY8 438 aa20.22■□□□□ 0.83
DDR1-228ENST00000376575 ZNF217O75362 1048 aa20.22■□□□□ 0.83
DDR1-228ENST00000376575 CSNK1DP48730 415 aa20.22■□□□□ 0.83
DDR1-228ENST00000376575 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
DDR1-228ENST00000376575 NSUN2Q08J23 767 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDR1-228ENST00000376575 SLC10A7Q0GE19 358 aa20.22■□□□□ 0.83
DDR1-228ENST00000376575 KLF1Q13351 362 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms