RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 NDRG1Q92597 394 aaKnown RBP13.8□□□□□ -0.2
C9orf47-203ENST00000375851 SERAC1Q96JX3 654 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 NDNQ99608 321 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 SIX2Q9NPC8 291 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 MIEF1Q9NQG6 463 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 ARL15Q9NXU5 204 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 OPTCQ9UBM4 332 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 OR6C75A6NL08 312 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 DEAF1O75398 565 aaPredicted RBP13.8□□□□□ -0.2
C9orf47-203ENST00000375851 FSBPO95073 299 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 FCGR1AP12314 374 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 SMPD1P17405 629 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 FASP25445 335 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 OR1D2P34982 312 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 WNT3AP56704 352 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 STXBP5Q5T5C0 1151 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 USP45Q70EL2 814 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 DHFR2Q86XF0 187 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 VPS33AQ96AX1 596 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 ITM2BQ9Y287 266 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 TCHHQ07283 1943 aa13.8□□□□□ -0.2
C9orf47-203ENST00000375851 CYP2A6P11509 494 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CHRNB2P17787 502 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 POLR2EP19388 210 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ABL2P42684 1182 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SPIRE1Q08AE8 756 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 PTPRNQ16849 979 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 STX19Q8N4C7 294 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 NKAPQ8N5F7 415 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 OMDQ99983 421 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SPACA6W5XKT8 324 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 A0A0G2JLL6 359 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SAC3D1A6NKF1 404 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ZBTB14O43829 449 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 DUSP11O75319 330 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CRY1Q16526 586 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SLC10A6Q3KNW5 377 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 POTEHQ6S545 545 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CYP2R1Q6VVX0 501 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ARCQ7LC44 396 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 PRRT2Q7Z6L0 340 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 PTGR2Q8N8N7 351 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 FAM126AQ9BYI3 521 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 RBPJLQ9UBG7 517 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 RFX3P48380 749 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 HSPA14Q0VDF9 509 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TRAF2Q12933 501 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 YTHDF3Q7Z739 585 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ZNF557Q8N988 423 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ATAD1Q8NBU5 361 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SPPL2BQ8TCT7 592 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 ZDHHC6Q9H6R6 413 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 UNC5CO95185 931 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 OCM2P0CE71 109 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TYMPP19971 482 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 DGKAP23743 735 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 S100A5P33763 92 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 RAD23AP54725 363 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 CDK18Q07002 472 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 DUSP4Q13115 394 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 FAM45BPQ6NSW5 357 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 IL27RAQ6UWB1 636 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 FAM45AQ8TCE6 357 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 GFM2Q969S9 779 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 KLHL5Q96PQ7 755 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 SORCS3Q9UPU3 1222 aa13.79□□□□□ -0.2
C9orf47-203ENST00000375851 TNPO3Q9Y5L0 923 aaKnown RBP13.79□□□□□ -0.2
C9orf47-203ENST00000375851 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-203ENST00000375851 H3BMM5 538 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PSMD12O00232 456 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-203ENST00000375851 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
C9orf47-203ENST00000375851 ASGR1P07306 291 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 SNRPD1P62314 119 aaKnown RBP13.78□□□□□ -0.2
C9orf47-203ENST00000375851 RUNX1T1Q06455 604 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PRMT9Q6P2P2 845 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PACS1Q6VY07 963 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-203ENST00000375851 CORO1BQ9BR76 489 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 FZD8Q9H461 694 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
C9orf47-203ENST00000375851 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms