RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CHRAC1Q9NRG0 131 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 IARS2Q9NSE4 1012 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 KLHL8Q9P2G9 620 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 GABRQQ9UN88 632 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 RAP2CQ9Y3L5 183 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 CDK4P11802 303 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 INSRRP14616 1297 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 PTPN1P18031 435 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ME2P23368 584 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 LMO2P25791 158 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SLC5A2P31639 672 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SCNN1BP51168 640 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SH3BGRP55822 239 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ART3Q13508 389 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 CYTH1Q15438 398 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SPATA6LQ8N4H0 392 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM151AQ8N4L1 468 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 RNF139Q8WU17 664 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 C20orf96Q9NUD7 363 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ADAM28Q9UKQ2 775 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 PRSS51A0A1B0GVH4 220 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM233B4DJY2 109 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 MPOP05164 745 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SETSIPP0DME0 302 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ARSAP15289 507 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 PPARGP37231 505 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 GLUD2P49448 558 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SULT1E1P49888 294 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 HPCAP84074 193 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM259Q4ZIN3 620 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 GLRA4Q5JXX5 417 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 IL23RQ5VWK5 629 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 PDCD6IPQ8WUM4 868 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ATP6V1E2Q96A05 226 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ZFRQ96KR1 1074 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 DRC3Q9H069 523 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 HEMK1Q9Y5R4 338 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 HBP1O60381 514 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 LGALS2P05162 132 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 MPP3Q13368 585 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 GRM3Q14832 879 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 DUSP28Q4G0W2 176 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ZFP1Q6P2D0 407 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM135Q86UB9 458 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ZDHHC17Q8IUH5 632 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 PGAM4Q8N0Y7 254 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM102Q8N9M5 508 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SREK1Q8WXA9 508 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 TMIGD2Q96BF3 282 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SCYL1Q96KG9 808 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SMARCAD1Q9H4L7 1026 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 SUDS3Q9H7L9 328 aaPredicted RBP14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 RHBDL2Q9NX52 303 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 UBP1Q9NZI7 540 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 DMTF1Q9Y222 760 aa14.34□□□□□ -0.11
CLCNKA-202ENST00000375692 C7orf72A4D263 438 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ACOT8O14734 319 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 BCAS2O75934 225 aaPredicted RBP14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 CSPG5O95196 566 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 NME3Q13232 169 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 APOFQ13790 326 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF410Q86VK4 478 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 LSMEM2Q8N112 164 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 PCDH20Q8N6Y1 951 aaKnown RBP14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 PCDHAC1Q9H158 963 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 LIN28AQ9H9Z2 209 aaKnown RBP14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 PRDM16Q9HAZ2 1276 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ADA2Q9NZK5 511 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 BFARQ9NZS9 450 aa14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 RUVBL2Q9Y230 463 aaKnown RBP14.33□□□□□ -0.11
CLCNKA-202ENST00000375692 ZSWIM8A7E2V4 1837 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 TCAF2A6NFQ2 919 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM72CH0Y354 149 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FGFR3P22607 806 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 NOGQ13253 232 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 ZNF460Q14592 562 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM187BQ17R55 369 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 MGAT5BQ3V5L5 792 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 KCNMB4Q86W47 210 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM72BQ86X60 149 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 PSTKQ8IV42 348 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms