RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 INPP5AQ14642 412 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ICE2Q659A1 982 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 CLEC20AQ6ZU45 233 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 OR52K2Q8NGK3 314 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 KCTD4Q8WVF5 259 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC7A5P2Q9GIP4 190 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ELOVL6Q9H5J4 265 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ZMYM5Q9UJ78 669 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 AGO1Q9UL18 857 aaKnown RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 PCDHA11Q9Y5I1 949 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 A0A0U1RQF3 1178 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 FNBP1LQ5T0N5 605 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 PHACTR4Q8IZ21 702 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 FUKQ8N0W3 1084 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 TMEM159Q96B96 161 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 PRDM16Q9HAZ2 1276 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 RXFP1Q9HBX9 757 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 CFAP97Q9P2B7 532 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 C1orf232A0A0U1RR37 186 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 NRP1O14786 923 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 UBDO15205 165 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 BST1Q10588 318 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 SPDYCQ5MJ68 293 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 ARHGAP17Q68EM7 881 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 MARK2Q7KZI7 788 aaKnown RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC44A2Q8IWA5 706 aaPredicted RBP18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 METTL6Q8TCB7 284 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 NOD2Q9HC29 1040 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 CHD4Q14839 1912 aa18.2■□□□□ 0.5
PTPDC1-202ENST00000375360 FAM237BA0A1B0GVD1 139 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 E9PAM4 449 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 WARSP23381 471 aaKnown RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 SCARA3Q6AZY7 606 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 ERAP2Q6P179 960 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 TRIM48Q8IWZ4 208 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 OR7D4Q8NG98 312 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 AUTS2Q8WXX7 1259 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 SUSD6Q92537 303 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MCRS1Q96EZ8 462 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MED8Q96G25 268 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 KIF17Q9P2E2 1029 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 PKD1L3Q7Z443 1732 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MTA2O94776 668 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 EDNRBP24530 442 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 SOAT1P35610 550 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 CYLC2Q14093 348 aaPredicted RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 RCN1Q15293 331 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 HIST2H2ACQ16777 129 aaPredicted RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 HIST2H2AA3Q6FI13 130 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 DET1Q7L5Y6 550 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 RRM2BQ7LG56 351 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 TRIB2Q92519 343 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MFSD3Q96ES6 412 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 BORCS6Q96GS4 357 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 POMKQ9H5K3 350 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MYH11P35749 1972 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 EOMESO95936 686 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 PFKPQ01813 784 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 HFE2Q6ZVN8 426 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 EMID1Q96A84 441 aaPredicted RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 AGO3Q9H9G7 860 aaKnown RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 EVPLLA8MZ36 301 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 MYO1GB0I1T2 1018 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 TRIM32Q13049 653 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 CAMK2GQ13555 558 aaPredicted RBP18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 TMEM130Q8N3G9 435 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 FBXO22Q8NEZ5 403 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 LMO3Q8TAP4 145 aa18.19■□□□□ 0.5
PTPDC1-202ENST00000375360 ZSCAN9O15535 394 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 OGDHQ02218 1023 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 CRYMQ14894 314 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 FAM187BQ17R55 369 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 DCAF12L1Q5VU92 463 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 TRABD2AQ86V40 505 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 DEFB107AQ8IZN7 70 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 MIER2Q8N344 545 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 TBC1D19Q8N5T2 526 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 VPS37AQ8NEZ2 397 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 FAR2Q96K12 515 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ABCG8Q9H221 673 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ACSS2Q9NR19 701 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 CCDC167Q9P0B6 97 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 EIF3LQ9Y262 564 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 ARVCFO00192 962 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 CCL16O15467 120 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 STAU1O95793 577 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 FGBP02675 491 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 TFEBP19484 476 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 CCNG1P51959 295 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SNRPD1P62314 119 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 POLR2LP62875 67 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SERPINA13PQ6UXR4 307 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 KYAT3Q6YP21 454 aaKnown RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC22A9Q8IVM8 553 aa18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
PTPDC1-202ENST00000375360 CLEC4FQ8N1N0 589 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms