RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 YJEFN3A6XGL0 299 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 E7ENQ6 273 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 HAPLN1P10915 354 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 IL9P15248 144 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 EZRP15311 586 aaKnown RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 PSMB4P28070 264 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CRADDP78560 199 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 IFRD2Q12894 506 aaPredicted RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 E2F5Q15329 346 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 DDR2Q16832 855 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 ATAT1Q5SQI0 421 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 BSPRYQ5W0U4 402 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 STEAP4Q687X5 459 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CLNKQ7Z7G1 428 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CCNJLQ8IV13 435 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 NDUFAF2Q8N183 169 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 ARMC2Q8NEN0 867 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 C2orf15Q8WU43 125 aaKnown RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CDKL2Q92772 493 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 KCNK16Q96T55 309 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 SMOQ99835 787 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 CNGB3Q9NQW8 809 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 MAFFQ9ULX9 164 aa15.85■□□□□ 0.13
CCDC40-202ENST00000374876 MTO1Q9Y2Z2 717 aaKnown RBP15.85■□□□□ 0.13
CCDC40-202ENST00000374876 DCLK1O15075 740 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ALDH1A2O94788 518 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 IL1BP01584 269 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 FYNP06241 537 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 HNRNPA1P09651 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 NCAM1P13591 858 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 PGAM1P18669 254 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ALDH1A3P47895 512 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 TUFMP49411 452 aaKnown RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 NTHL1P78549 312 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 WASHC5Q12768 1159 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 SMAD4Q13485 552 aaKnown RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 MAPRE1Q15691 268 aaKnown RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 C4orf50Q6ZRC1 276 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 CCDC91Q7Z6B0 441 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 GRASPQ7Z6J2 395 aaPredicted RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 SCN4BQ8IWT1 228 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ZNF567Q8N184 647 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 GIPC2Q8TF65 315 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 NTAN1Q96AB6 310 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 SAR1AQ9NR31 198 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 PIH1D1Q9NWS0 290 aaKnown RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 DNMT3BQ9UBC3 853 aaKnown RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 HEY2Q9UBP5 337 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 C2orf16Q68DN1 1984 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 HMX2A2RU54 273 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 A8MUI8 341 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ZNF189O75820 626 aaPredicted RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 CBX6O95503 412 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 USP17L7P0C7H9 530 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 T-ENOLP0DO92 83 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ATF6P18850 670 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 MGAT1P26572 445 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 CRHR1P34998 444 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 CACNA2D1P54289 1103 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 TPI1P60174 286 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ZBTB16Q05516 673 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ARL13BQ3SXY8 428 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 PREPLQ4J6C6 727 aaPredicted RBP15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ATG16L1Q676U5 607 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 PID1Q7Z2X4 250 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 SUSD6Q92537 303 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 ASB2Q96Q27 587 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 NAT9Q9BTE0 207 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 MECRQ9BV79 373 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 TMEM120AQ9BXJ8 343 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 DDIT4Q9NX09 232 aa15.84■□□□□ 0.13
CCDC40-202ENST00000374876 FAM72CH0Y354 149 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 HNRNPCL1O60812 293 aaKnown RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 DLDP09622 509 aaKnown RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 ERCC2P18074 760 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 SP100P23497 879 aaPredicted RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 HOXA9P31269 272 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 GRIK1P39086 918 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 TMPRSS15P98073 1019 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 SCAPQ12770 1279 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 CBX2Q14781 532 aaPredicted RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 AAK1Q2M2I8 961 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 WLSQ5T9L3 541 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 FAM72AQ5TYM5 149 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 FAM72DQ6L9T8 149 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 TIFABQ6ZNK6 161 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 MARK2Q7KZI7 788 aaKnown RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 GPRIN1Q7Z2K8 1008 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 FAM72BQ86X60 149 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 NUDCD3Q8IVD9 361 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 UNC5BQ8IZJ1 945 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 E2F7Q96AV8 911 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 POMKQ9H5K3 350 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 WDR6Q9NNW5 1121 aaKnown RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 KLHL8Q9P2G9 620 aaPredicted RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 IGSF9Q9P2J2 1179 aa15.83■□□□□ 0.12
CCDC40-202ENST00000374876 HSFX1Q9UBD0 423 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms