RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 HEMGNQ9BXL5 484 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 CACNA1IQ9P0X4 2223 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 FCF1Q9Y324 198 aaKnown RBP15.3■□□□□ 0.04
HSPG2-201ENST00000374673 HEY1Q9Y5J3 304 aa15.3■□□□□ 0.04
HSPG2-201ENST00000374673 TCRBV21S2A2A0A5A6 115 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 APOC4-APOC2K7ER74 178 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 SIN3BO75182 1162 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF821O75541 412 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-201ENST00000374673 TMCC1O94876 653 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 TJP3O95049 919 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 APBB3O95704 486 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PEX11BO96011 259 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 APOC2P02655 101 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 VAV1P15498 845 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-201ENST00000374673 CCNCP24863 283 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 COPAP53621 1224 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PPIDQ08752 370 aaKnown RBP15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PDK1Q15118 436 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 C9orf64Q5T6V5 341 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 TMCO4Q5TGY1 634 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 LEKR1Q6ZMV7 388 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 Q6ZVU0 165 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PLPP6Q8IY26 295 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 OR2T3Q8NH03 318 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 P3H4Q92791 437 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
HSPG2-201ENST00000374673 BRD8Q9H0E9 1235 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 EML5Q05BV3 1969 aa15.29■□□□□ 0.04
HSPG2-201ENST00000374673 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 KCNK3O14649 394 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ENC1O14682 589 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 PPP1R12AO14974 1030 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ALOX15BO15296 676 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 GSRP00390 522 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 GABRG2P18507 467 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 KLF1Q13351 362 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ELAVL3Q14576 367 aaKnown RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 LBRQ14739 615 aaKnown RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ANGPT1Q15389 498 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 CYTH1Q15438 398 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ZNF528Q3MIS6 628 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 MDGA1Q8NFP4 955 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 OR2A12Q8NGT7 310 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 PRRX2Q99811 253 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-201ENST00000374673 EBF1Q9UH73 591 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 ZKSCAN5Q9Y2L8 839 aa15.28■□□□□ 0.04
HSPG2-201ENST00000374673 CCDC163A0A0D9SF12 145 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 MCF2LO15068 1137 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 MATN3O15232 486 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 ZBTB24O43167 697 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 NDUFV2P19404 249 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 GNG11P61952 73 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 SNRPD1P62314 119 aaKnown RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 CSTF1Q05048 431 aaKnown RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 SLC10A7Q0GE19 358 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 HNRNPDQ14103 355 aaKnown RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 NOMO1Q15155 1222 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 CARD16Q5EG05 197 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 ANO7Q6IWH7 933 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 TSSK4Q6SA08 328 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 CCDC13Q8IYE1 715 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 STK40Q8N2I9 435 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 C17orf53Q8N3J3 647 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 OR2AP1Q8NGE2 309 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 MAML1Q92585 1016 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 NELL1Q92832 810 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 HAUS1Q96CS2 278 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 MRGPRX1Q96LB2 322 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 FAM129BQ96TA1 746 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 CINPQ9BW66 212 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 FAM126AQ9BYI3 521 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 TNKS2Q9H2K2 1166 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-201ENST00000374673 LHX3Q9UBR4 397 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 SEPT3Q9UH03 358 aa15.27■□□□□ 0.04
HSPG2-201ENST00000374673 FANCMQ8IYD8 2048 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 ANKRD36A6QL64 1941 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 IGSF6O95976 241 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
HSPG2-201ENST00000374673 RECQLP46063 649 aaPredicted RBP15.26■□□□□ 0.03
HSPG2-201ENST00000374673 RHOAP61586 193 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
HSPG2-201ENST00000374673 XRCC4Q13426 336 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 PRKD1Q15139 912 aaPredicted RBP15.26■□□□□ 0.03
HSPG2-201ENST00000374673 CCDC181Q5TID7 509 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 MARC1Q5VT66 337 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 ZNF776Q68DI1 518 aaPredicted RBP15.26■□□□□ 0.03
HSPG2-201ENST00000374673 DPY19L3Q6ZPD9 716 aa15.26■□□□□ 0.03
HSPG2-201ENST00000374673 SLC13A5Q86YT5 568 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms