RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 C20orf96Q9NUD7 363 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 MARCOQ9UEW3 520 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 LNPEPQ9UIQ6 1025 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 NUDT5Q9UKK9 219 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 ZCWPW2A0A1B0GU75 182 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 TRAFD1O14545 582 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 TNFRSF10BO14763 440 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 PLIN3O60664 434 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 CCDC22O60826 627 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 NEBLO76041 1014 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 DDHD2O94830 711 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 KCNA4P22459 653 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 AQP5P55064 265 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 ERVK-21P61565 698 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 INSCQ1MX18 579 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 NOMO2Q5JPE7 1267 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 OTOP3Q7RTS5 596 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 UTP4Q969X6 686 aaKnown RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 RILPQ96NA2 401 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 FAM193BQ96PV7 902 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 AGAP2Q99490 1192 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 RBBP8Q99708 897 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 WWP1Q9H0M0 922 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 SNX15Q9NRS6 342 aa12.3□□□□□ -0.44
HMGCL-202ENST00000374487 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-202ENST00000374487 A0A1W2PQH9 124 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 FCHO1O14526 889 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SNNO75324 88 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 FOSL2P15408 326 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CCND1P24385 295 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 HTR7P34969 479 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CTNNB1P35222 781 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 PGFP49763 221 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SERPINB8P50452 374 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 TUBP50607 506 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 PPP2R5DQ14738 602 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 TEDDM1Q5T9Z0 273 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ARHGAP36Q6ZRI8 547 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SCD5Q86SK9 330 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 KCNMB4Q86W47 210 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 AGAP11Q8TF27 550 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 TSGA13Q96PP4 275 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CWH43Q9H720 699 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 PRDM6Q9NQX0 595 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ARL8BQ9NVJ2 186 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 EMCNQ9ULC0 261 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 PRG3Q9Y2Y8 225 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ZNF638Q14966 1978 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 E2F8A0AVK6 867 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 INPPL1O15357 1258 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 TADA2AO75478 443 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ANXA9O76027 345 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 DNAJB1P25685 340 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 LIMK2P53671 638 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 MPP3Q13368 585 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 FRG1Q14331 258 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 DDR2Q16832 855 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 CMC1Q7Z7K0 106 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ALYREFQ86V81 257 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 WDR75Q8IWA0 830 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ZSCAN18Q8TBC5 510 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SERPINB11Q96P15 392 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 C20orf27Q9GZN8 174 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 NMUR1Q9HB89 426 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 DNAJB4Q9UDY4 337 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 SOX13Q9UN79 622 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 HBS1LQ9Y450 684 aaKnown RBP12.29□□□□□ -0.44
HMGCL-202ENST00000374487 L3MBTL1Q9Y468 752 aa12.29□□□□□ -0.44
HMGCL-202ENST00000374487 MATN3O15232 486 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 GRM6O15303 877 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 GYG2O15488 501 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TIMM44O43615 452 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 MAFKO60675 156 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 OAZ2O95190 189 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 GSRP00390 522 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 CALB2P22676 271 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 BMPR1AP36894 532 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SLC1A6P48664 564 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 NFE2Q16621 373 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 CCDC153Q494R4 210 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SPOUT1Q5T280 376 aaKnown RBP12.28□□□□□ -0.44
HMGCL-202ENST00000374487 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 MBLAC2Q68D91 279 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 MON1AQ86VX9 555 aa12.28□□□□□ -0.44
HMGCL-202ENST00000374487 TMEM173Q86WV6 379 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms