RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MEI4A8MW99 385 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 B2RBV5 119 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 CCL22O00626 93 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 TRAFD1O14545 582 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 GSC2O15499 205 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 FGF10O15520 208 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 EOMESO95936 686 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 AHSGP02765 367 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 CYP2C18P33260 490 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 ETFBP38117 255 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 ZNF135P52742 658 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 MON1AQ86VX9 555 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 ABI1Q8IZP0 508 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 MAGEC3Q8TD91 643 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 GIPC2Q8TF65 315 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 TSGA13Q96PP4 275 aa16.23■□□□□ 0.19
CNKSR1-202ENST00000374253 AURKAO14965 403 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 PEX11AO75192 247 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 SERPINE1P05121 402 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 CALB2P22676 271 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 CCND1P24385 295 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 SLC10A7Q0GE19 358 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 USP10Q14694 798 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MS4A13Q5J8X5 152 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ZNF280DQ6N043 979 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 POU5F2Q8N7G0 328 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 IGSF8Q969P0 613 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 FBXO32Q969P5 355 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 CLPTM1LQ96KA5 538 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MRGPRX2Q96LB1 330 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 FCRL5Q96RD9 977 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 NUDCD1Q96RS6 583 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 KIFC1Q9BW19 673 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MAN1C1Q9NR34 630 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 SCML2Q9UQR0 700 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 PATJQ8NI35 1801 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 NBNO60934 754 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ALDH1A1P00352 501 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ARNTP27540 789 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 HOXC13P31276 330 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 TAF10Q12962 218 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 WLSQ5T9L3 541 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MAP3K21Q5TCX8 1036 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 PKN3Q6P5Z2 889 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 LINC00523Q86TU6 105 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ZC3HC1Q86WB0 502 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 WDR75Q8IWA0 830 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 TASP1Q9H6P5 420 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ADAM28Q9UKQ2 775 aa16.22■□□□□ 0.19
CNKSR1-202ENST00000374253 ARHGEF37A1IGU5 675 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 MAGEB16A2A368 324 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 CAPN14A8MX76 684 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 G3V2L1 256 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 MAGEA12P43365 314 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 IHHQ14623 411 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 TCTN1Q2MV58 587 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 PCID2Q5JVF3 399 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 BEND5Q7L4P6 421 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 TAS1R1Q7RTX1 841 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 TEX9Q8N6V9 391 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 ZNF781Q8N8C0 355 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 RAB3IL1Q8TBN0 382 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 KCTD4Q8WVF5 259 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 PSMG2Q969U7 264 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 NMRAL1Q9HBL8 299 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 PCDH10Q9P2E7 1040 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 FRMPD3Q5JV73 1810 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 CACNG3O60359 315 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 ANXA9O76027 345 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 INHAP05111 366 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 CD86P42081 329 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 SESN3P58005 492 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 ABCE1P61221 599 aaKnown RBP16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 KHDC1Q4VXA5 237 aaKnown RBP16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 SPDYAQ5MJ70 313 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 RTP2Q5QGT7 225 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 STXBP5Q5T5C0 1151 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 RNF19BQ6ZMZ0 732 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 CEP97Q8IW35 865 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 SHKBP1Q8TBC3 707 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 PPP4R1Q8TF05 950 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 NSMCE1Q8WV22 266 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 SCYL1Q96KG9 808 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 CCSER2Q9H7U1 834 aa16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 COL4A4P53420 1690 aaPredicted RBP16.21■□□□□ 0.19
CNKSR1-202ENST00000374253 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 TIMM44O43615 452 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms