RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SPATA6LQ8N4H0 392 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 SH3KBP1Q96B97 665 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 NKX1-2Q9UD57 310 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 COL14A1Q05707 1796 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 GCATO75600 419 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ARF4P18085 180 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 TKTP29401 623 aaKnown RBP17.64■□□□□ 0.41
PTPRU-202ENST00000373779 PPP3CCP48454 512 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 SCNN1BP51168 640 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 LRRC74AQ0VAA2 488 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 PPM1JQ5JR12 505 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 VWA5B1Q5TIE3 1220 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ADCY4Q8NFM4 1077 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 NDNQ99608 321 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 ADGRE3Q9BY15 652 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 PALMDQ9NP74 551 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 TEKT2Q9UIF3 430 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 DMTF1Q9Y222 760 aa17.64■□□□□ 0.41
PTPRU-202ENST00000373779 BDNFP23560 247 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 CTBP1Q13363 440 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 PRKD1Q15139 912 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 TTC30AQ86WT1 665 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 MFSD11O43934 449 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 DLGAP3O95886 979 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 TCF4P15884 667 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 TTKP33981 857 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 MFSD10Q14728 455 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 PGS1Q32NB8 556 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 PLEKHO2Q8TD55 490 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 NPAS2Q99743 824 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 EPS8L2Q9H6S3 715 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 RCOR3Q9P2K3 495 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 TUBGCP4Q9UGJ1 667 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 RSL24D1Q9UHA3 163 aaKnown RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 CFAP99D6REC4 459 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 PLIN3O60664 434 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 HNRNPLP14866 589 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 VCLP18206 1134 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 ARHGEF7Q14155 803 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 SPDYE7PQ495Y7 208 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 UGT2B28Q9BY64 529 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 DPY30Q9C005 99 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 POMCP01189 267 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 CFHP08603 1231 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 PFKFB4Q16877 469 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 CERCAMQ5T4B2 595 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 EID3Q8N140 333 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 GPR88Q9GZN0 384 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 RHOJQ9H4E5 214 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 TRIM45Q9H8W5 580 aaPredicted RBP17.63■□□□□ 0.41
PTPRU-202ENST00000373779 IMPAD1Q9NX62 359 aa17.63■□□□□ 0.41
PTPRU-202ENST00000373779 BTN3A1O00481 513 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 MSX2P35548 267 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 RRM2BQ7LG56 351 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 AMIGO2Q86SJ2 522 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 PTGR2Q8N8N7 351 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 LPCAT1Q8NF37 534 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 ITFG1Q8TB96 612 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 PTCD3Q96EY7 689 aaKnown RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 AK5Q9Y6K8 562 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 C2CD4BA6NLJ0 364 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 TFEBP19484 476 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 METTL21CQ5VZV1 264 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 SEMA4BQ9NPR2 832 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 NFE2Q16621 373 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 DSELQ8IZU8 1212 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 ZNF570Q96NI8 536 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 LIMD1Q9UGP4 676 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 DAPK2Q9UIK4 370 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 RGPD5Q99666 1765 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 KATNA1O75449 491 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 RHOCP08134 193 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 PRDX6P30041 224 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 OR1E1P30953 314 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 FAM45BPQ6NSW5 357 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 METTL6Q8TCB7 284 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 FAM45AQ8TCE6 357 aa17.62■□□□□ 0.41
PTPRU-202ENST00000373779 MAGEE2Q8TD90 523 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-202ENST00000373779 ITGALP20701 1170 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 ASPAP45381 313 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 MAPK10P53779 464 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 MAD2L1Q13257 205 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CDH18Q13634 790 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CTXN3Q4LDR2 81 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 GPR20Q99678 358 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 HGH1Q9BTY7 390 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 FBXO44Q9H4M3 255 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 ABCC13Q9NSE7 274 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 TCRBV7S3A2A0A539 114 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 DHX15O43143 795 aaKnown RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 OCM2P0CE71 109 aa17.61■□□□□ 0.41
PTPRU-202ENST00000373779 OCMP0CE72 109 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 POLD3Q15054 466 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 CCDC85BQ15834 202 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-202ENST00000373779 EML3Q32P44 896 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms