RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 HNRNPH1P31943 449 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 INSCQ1MX18 579 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 USP41Q3LFD5 358 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 FASTKD1Q53R41 847 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 CES4AQ5XG92 561 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.17■□□□□ 0.55e-11■■■■□ 24.7
CTSA-204ENST00000372484 MTDHQ86UE4 582 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 PABPC5Q96DU9 382 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 MRGPRX2Q96LB1 330 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
CTSA-204ENST00000372484 ATXN3LQ9H3M9 355 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 KCNK13Q9HB14 408 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 SP110Q9HB58 689 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 NT5MQ9NPB1 228 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 ZFP69BQ9UJL9 534 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 MYLKQ15746 1914 aa18.17■□□□□ 0.5
CTSA-204ENST00000372484 TIMM44O43615 452 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 PLIN3O60664 434 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 PARNO95453 639 aaKnown RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 OR1D2P34982 312 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 ABCG1P45844 678 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 CSE1LP55060 971 aaKnown RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 ITKQ08881 620 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 PCSK7Q16549 785 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 ACBD5Q5T8D3 534 aaPredicted RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 MARC1Q5VT66 337 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 POTEHQ6S545 545 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 CCDC91Q7Z6B0 441 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 PPHLN1Q8NEY8 458 aaKnown RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 PPP1R14CQ8TAE6 165 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 PSMG2Q969U7 264 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 ISL2Q96A47 359 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 TMEM120AQ9BXJ8 343 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 SLC25A51Q9H1U9 297 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 MTRRQ9UBK8 725 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 MTO1Q9Y2Z2 717 aaKnown RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 BPTFQ12830 3046 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 E2F8A0AVK6 867 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 DRGXA6NNA5 263 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 GSRP00390 522 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 CCL5P13501 91 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 MAGEA12P43365 314 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 KPNA1P52294 538 aaPredicted RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 KCNJ2P63252 427 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 OCRLQ01968 901 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 SLC10A7Q0GE19 358 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 STX3Q13277 289 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 DBN1Q16643 649 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 TAF1BQ53T94 588 aaPredicted RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 RANBP10Q6VN20 620 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 ZCCHC23Q6ZST2 131 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 CIR1Q86X95 450 aaPredicted RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 CCDC117Q8IWD4 279 aaPredicted RBP18.16■□□□□ 0.5
CTSA-204ENST00000372484 FATE1Q969F0 183 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 KLHL5Q96PQ7 755 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 NSMCE4AQ9NXX6 385 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 TRIM33Q9UPN9 1127 aa18.16■□□□□ 0.5
CTSA-204ENST00000372484 RAMP2O60895 175 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 ATP5HO75947 161 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 NQO1P15559 274 aaKnown RBP18.15■□□□□ 0.5
CTSA-204ENST00000372484 TARSP26639 723 aaKnown RBP18.15■□□□□ 0.5
CTSA-204ENST00000372484 OR1E1P30953 314 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 WNT3AP56704 352 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 MAXP61244 160 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 ELF3P78545 371 aaPredicted RBP18.15■□□□□ 0.5
CTSA-204ENST00000372484 POLD3Q15054 466 aaPredicted RBP18.15■□□□□ 0.5
CTSA-204ENST00000372484 KIAA1841Q6NSI8 718 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 SLC39A5Q6ZMH5 540 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 ASRGL1Q7L266 308 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 KIF2BQ8N4N8 673 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 NSMCE1Q8WV22 266 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 VPS39Q96JC1 886 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 TTLL2Q9BWV7 592 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 ZNF395Q9H8N7 513 aaPredicted RBP18.15■□□□□ 0.5
CTSA-204ENST00000372484 CAB39LQ9H9S4 337 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 TMEM216Q9P0N5 145 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 HEY2Q9UBP5 337 aa18.15■□□□□ 0.5
CTSA-204ENST00000372484 SNNO75324 88 aaPredicted RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 MYL2P10916 166 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 KCNA4P22459 653 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 GMPRP36959 345 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 TUFMP49411 452 aaKnown RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 KCNQ1P51787 676 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 NADSYN1Q6IA69 706 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 CLNKQ7Z7G1 428 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 PTCD2Q8WV60 388 aaKnown RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 IMP4Q96G21 291 aaKnown RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 ZNF512Q96ME7 567 aaPredicted RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 CDK5RAP1Q96SZ6 601 aaKnown RBP18.14■□□□□ 0.5
CTSA-204ENST00000372484 NACA2Q9H009 215 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 ZNF212Q9UDV6 495 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 DNMT3LQ9UJW3 386 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 TCAF1Q9Y4C2 921 aa18.14■□□□□ 0.5
CTSA-204ENST00000372484 A0A096LPK6 155 aa18.14■□□□□ 0.49
CTSA-204ENST00000372484 VAPBO95292 243 aa18.14■□□□□ 0.49
CTSA-204ENST00000372484 PROCP04070 461 aa18.14■□□□□ 0.49
CTSA-204ENST00000372484 MPOP05164 745 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms