RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM50BQ9Y247 325 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 TMEM5Q9Y2B1 443 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 SIN3BO75182 1162 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 NDUFS3O75489 264 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 BNIP1Q12981 228 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 C7orf61Q8IZ16 206 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 TMEM120AQ9BXJ8 343 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 HS6ST1O60243 411 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 YWHAQP27348 245 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 PKN1Q16512 942 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 POTEHQ6S545 545 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 PHC2Q8IXK0 858 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 TRPV3Q8NET8 790 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 TFR2Q9UP52 801 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 IRAK3Q9Y616 596 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 SAGE2PA6NJ88 616 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLCO1B7G3V0H7 640 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 DBTP11182 482 aaKnown RBP14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 ATP6V1C1P21283 382 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 MSLNQ13421 630 aaPredicted RBP14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 DGCR6Q14129 220 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 PDK3Q15120 406 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZNF720Q7Z2F6 126 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 ULK2Q8IYT8 1036 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 DEFB107AQ8IZN7 70 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 KYQ8NBH2 561 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 OGDHLQ9ULD0 1010 aa14.24□□□□□ -0.13
RAPGEF1-202ENST00000372190 USP12O75317 370 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 COPZ1P61923 177 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ELF3P78545 371 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 KLHDC7AQ5VTJ3 777 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 FAM228AQ86W67 206 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 S100A13Q99584 98 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 IRF2BPLQ9H1B7 796 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 EPB41L4BQ9H329 900 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CLEC4AQ9UMR7 237 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 NFASCO94856 1347 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 FAUP35544 74 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ARL3P36405 182 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 OXCT1P55809 520 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC5A9Q2M3M2 681 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 OTUD3Q5T2D3 398 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 AADACL4Q5VUY2 407 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 DHFR2Q86XF0 187 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CHERPQ8IWX8 916 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 FEZF2Q8TBJ5 459 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 KBTBD7Q8WVZ9 684 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ERMAPQ96PL5 475 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CYP3A43Q9HB55 503 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ALG6Q9Y672 507 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ACKR2O00590 384 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CD3EAPO15446 510 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CA12O43570 354 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 CDC25CP30307 473 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 HIPK3Q9H422 1215 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 SAV1Q9H4B6 383 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 FBXO44Q9H4M3 255 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 VPS28Q9UK41 221 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 TFECO14948 347 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 PSMG1O95456 288 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 RARRES1P49788 294 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 RPP38P78345 283 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 PDPK2PQ6A1A2 396 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 IPMKQ8NFU5 416 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 HTRA1Q92743 480 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 TUBGCP5Q96RT8 1024 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZNF304Q9HCX3 659 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 SNX8Q9Y5X2 465 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 STX16-NPEPL1H3BU86 382 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 STX16O14662 325 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 MAPTP10636 758 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 MAPK1P28482 360 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 MYL6P60660 151 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ITGA7Q13683 1181 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZCCHC8Q6NZY4 707 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 OOSP2Q86WS3 158 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 HS6ST3Q8IZP7 471 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 FUKQ8N0W3 1084 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 TPCN2Q8NHX9 752 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 TMEM176AQ96HP8 235 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 KLF6Q99612 283 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 MED28Q9H204 178 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 PAK5Q9P286 719 aa14.23□□□□□ -0.13
RAPGEF1-202ENST00000372190 F9P00740 461 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 THRBP10828 461 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 CLUP10909 449 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ATP6AP1LQ52LC2 224 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 TEX19Q8NA77 164 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms