RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 TACO1Q9BSH4 297 aaKnown RBP18.8■□□□□ 0.6
VEGFA-206ENST00000372077 GDE1Q9NZC3 331 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 NINJ2Q9NZG7 142 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 RASA4BC9J798 803 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 DFFAO00273 331 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 RASA4O43374 803 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 MAFKO60675 156 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 LTBRP36941 435 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 PAPOLAP51003 745 aaKnown RBP18.8■□□□□ 0.6
VEGFA-206ENST00000372077 ATAT1Q5SQI0 421 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 CELF5Q8N6W0 485 aaKnown RBP18.8■□□□□ 0.6
VEGFA-206ENST00000372077 SNF8Q96H20 258 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 TBC1D30Q9Y2I9 924 aa18.8■□□□□ 0.6
VEGFA-206ENST00000372077 PRRC2BQ5JSZ5 2229 aaKnown RBP18.79■□□□□ 0.6
VEGFA-206ENST00000372077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-206ENST00000372077 GOLGA8RI6L899 631 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 RASSF9O75901 435 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ITIH2P19823 946 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 WASHC5Q12768 1159 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 GPS1Q13098 491 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 PARP15Q460N3 678 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ACCSLQ4AC99 568 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ARHGAP36Q6ZRI8 547 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 TDRD5Q8NAT2 981 aaKnown RBP18.79■□□□□ 0.6
VEGFA-206ENST00000372077 TTC16Q8NEE8 873 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 DEPDC1BQ8WUY9 529 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 PGM2Q96G03 612 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 PAK5Q9P286 719 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-206ENST00000372077 MTSS1O43312 755 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 RAMP2O60895 175 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 TBL1XO60907 577 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 MPP7Q5T2T1 576 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 RNF43Q68DV7 783 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 SETD3Q86TU7 594 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 HMCESQ96FZ2 354 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 MSLNLQ96KJ4 702 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ASB16Q96NS5 453 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 FERMT1Q9BQL6 677 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 CLDND1Q9NY35 253 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 TBC1D14Q9P2M4 693 aa18.79■□□□□ 0.6
VEGFA-206ENST00000372077 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 ARHGAP42A6NI28 874 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 ZNF177Q13360 481 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 POLD3Q15054 466 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 SMAD1Q15797 465 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 MPPE1Q53F39 396 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CES5AQ6NT32 575 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 C4orf22Q6V702 233 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 FATE1Q969F0 183 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 PABPC5Q96DU9 382 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 RMDN2Q96LZ7 410 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 MAGEH1Q9H213 219 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CNOT10Q9H9A5 744 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 TRPV4Q9HBA0 871 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 SLCO1B3Q9NPD5 702 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 NYNRINQ9P2P1 1898 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 DNALI1O14645 258 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 FAM78AQ5JUQ0 283 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 GET4Q7L5D6 327 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 ANKS4BQ8N8V4 417 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 BBOF1Q8ND07 529 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 OR52K2Q8NGK3 314 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 SMARCD2Q92925 531 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 LRRC3BQ96PB8 259 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CHD5Q8TDI0 1954 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 A0A0A0MRY4 1105 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 ILVBLA1L0T0 632 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 TYW5A2RUC4 315 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 AGTP01019 485 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 STX2P32856 288 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CXorf57Q6NSI4 855 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CCDC110Q8TBZ0 833 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 OTUB2Q96DC9 234 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 SPATA13Q96N96 652 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 VPS37BQ9H9H4 285 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 IPO11Q9UI26 975 aaKnown RBP18.78■□□□□ 0.6
VEGFA-206ENST00000372077 CDH7Q9ULB5 785 aa18.78■□□□□ 0.6
VEGFA-206ENST00000372077 RNF103O00237 685 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 MATN3O15232 486 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 IGFBP4P22692 258 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 PTPN3P26045 913 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 GNA12Q03113 381 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 SLMAPQ14BN4 828 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 EFTUD2Q15029 972 aaKnown RBP eCLIP18.77■□□□□ 0.64e-10■■■■■ 38.6
VEGFA-206ENST00000372077 ANKRD20A2Q5SQ80 823 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 ANKRD20A1Q5TYW2 823 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 ANKRD20A3Q5VUR7 823 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 TIGD7Q6NT04 549 aaPredicted RBP18.77■□□□□ 0.6
VEGFA-206ENST00000372077 TRPM8Q7Z2W7 1104 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 LRCH3Q96II8 777 aa18.77■□□□□ 0.6
VEGFA-206ENST00000372077 KCNK1O00180 336 aa18.77■□□□□ 0.59
VEGFA-206ENST00000372077 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.59
VEGFA-206ENST00000372077 ERFP50548 548 aa18.77■□□□□ 0.59
VEGFA-206ENST00000372077 DNAJC3Q13217 504 aa18.77■□□□□ 0.59
VEGFA-206ENST00000372077 SERINC3Q13530 473 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms