RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RTL3Q8N8U3 475 aaKnown RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 TSNARE1Q96NA8 513 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 SERPINB11Q96P15 392 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 THTPAQ9BU02 230 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 MPP6Q9NZW5 540 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 CPSF2Q9P2I0 782 aaKnown RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 PTPRDP23468 1912 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 NLRC5Q86WI3 1866 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 FAM155AB1AL88 458 aaPredicted RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 INPPL1O15357 1258 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 H2AFYO75367 372 aaKnown RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 NEBLO76041 1014 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 APOA4P06727 396 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 THOC5Q13769 683 aaKnown RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 C14orf80Q86SX3 495 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 ZNF280BQ86YH2 543 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 MYCBPQ99417 103 aaPredicted RBP29.38■■■□□ 2.29
SSBP3-204ENST00000371320 TASP1Q9H6P5 420 aa29.38■■■□□ 2.29
SSBP3-204ENST00000371320 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.37■■■□□ 2.29
SSBP3-204ENST00000371320 B4GALT3O60512 393 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 AHSGP02765 367 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 HLA-DQB2P05538 268 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 SESN3P58005 492 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 ITGA7Q13683 1181 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 UGP2Q16851 508 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 POTEHQ6S545 545 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 NAF1Q96HR8 494 aaKnown RBP29.37■■■□□ 2.29
SSBP3-204ENST00000371320 OXCT2Q9BYC2 517 aaPredicted RBP29.37■■■□□ 2.29
SSBP3-204ENST00000371320 CDH19Q9H159 772 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 ENTPD7Q9NQZ7 604 aa29.37■■■□□ 2.29
SSBP3-204ENST00000371320 PMPCBO75439 489 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 CIB2O75838 187 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 VAPBO95292 243 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 ADRA1AP35348 466 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 CSRP3P50461 194 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 PAPOLAP51003 745 aaKnown RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 USP4Q13107 963 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 CFAP157Q5JU67 520 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 AFMIDQ63HM1 303 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 ULK2Q8IYT8 1036 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 ZNF781Q8N8C0 355 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 FSD1LQ9BXM9 530 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 ACE2Q9BYF1 805 aaPredicted RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 OXSMQ9NWU1 459 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 OSER1Q9NX31 292 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 PATJQ8NI35 1801 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 DDHD2O94830 711 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 ESRP1Q6NXG1 681 aaKnown RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 NET1Q7Z628 596 aaPredicted RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 CCDC117Q8IWD4 279 aaPredicted RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 DCP1BQ8IZD4 617 aaKnown RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 MAB21L3Q8N8X9 362 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 PCSK9Q8NBP7 692 aaKnown RBP29.36■■■□□ 2.29
SSBP3-204ENST00000371320 TCAF1Q9Y4C2 921 aa29.36■■■□□ 2.29
SSBP3-204ENST00000371320 PHGDHO43175 533 aaKnown RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 GABRB3P28472 473 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 MLLT6P55198 1093 aaPredicted RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 C6orf163Q5TEZ5 329 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 LRRC49Q8IUZ0 686 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 CNTN4Q8IWV2 1026 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 RDH11Q8TC12 318 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 CLPTM1LQ96KA5 538 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 C1QTNF1Q9BXJ1 281 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 ZCWPW1Q9H0M4 648 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 COG4Q9H9E3 785 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 SQORQ9Y6N5 450 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 MEI4A8MW99 385 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 F8W8V4 182 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 PRKAR2AP13861 404 aaKnown RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 NCF2P19878 526 aaPredicted RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 CST5P28325 142 aaPredicted RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 GCKP35557 465 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 NRG1Q02297 640 aaPredicted RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 SLC12A1Q13621 1099 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 NAA25Q14CX7 972 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 SDHAF4Q5VUM1 108 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 MON1AQ86VX9 555 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 PTCD2Q8WV60 388 aaKnown RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 GATA5Q9BWX5 397 aaPredicted RBP29.35■■■□□ 2.29
SSBP3-204ENST00000371320 CXorf56Q9H5V9 222 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 RGS18Q9NS28 235 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 SCML2Q9UQR0 700 aa29.35■■■□□ 2.29
SSBP3-204ENST00000371320 CPOXP36551 454 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 SLC34A1Q06495 639 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 ZYG11AQ6WRX3 759 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 SLC41A1Q8IVJ1 513 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 DENND6AQ8IWF6 608 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 C1orf74Q96LT6 269 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 ZIC5Q96T25 663 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 LBHD1Q9BQE6 289 aaPredicted RBP29.34■■■□□ 2.29
SSBP3-204ENST00000371320 IPO11Q9UI26 975 aaKnown RBP29.34■■■□□ 2.29
SSBP3-204ENST00000371320 TLR6Q9Y2C9 796 aa29.34■■■□□ 2.29
SSBP3-204ENST00000371320 OAZ2O95190 189 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 AVPR1AP37288 418 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 ARCN1P48444 511 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 CTBP1Q13363 440 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 DDR2Q16832 855 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 TRMT5Q32P41 509 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 EPGNQ6UW88 154 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 KDELC2Q7Z4H8 507 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms