RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 UGT1A10Q9HAW8 530 aa17.83■□□□□ 0.44
SSBP3-203ENST00000371319 UGT1A8Q9HAW9 530 aa17.83■□□□□ 0.44
SSBP3-203ENST00000371319 INTS9Q9NV88 658 aaKnown RBP17.83■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF180Q9UJW8 692 aa17.83■□□□□ 0.44
SSBP3-203ENST00000371319 IQANK1A0A1B0GTG1 560 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 A0A1B0GVM2 712 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 TCAF2A6NFQ2 919 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 GRXCR1A8MXD5 290 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 RHOCP08134 193 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MMP2P08253 660 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 INHBAP08476 426 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MYL4P12829 197 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 GJA1P17302 382 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MAXP61244 160 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 DSC2Q02487 901 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MPP3Q13368 585 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 IHHQ14623 411 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 LBRQ14739 615 aaKnown RBP17.82■□□□□ 0.44
SSBP3-203ENST00000371319 C9orf50Q5SZB4 431 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 TMCO4Q5TGY1 634 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 TTC39BQ5VTQ0 682 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-203ENST00000371319 CES3Q6UWW8 571 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 LEKR1Q6ZMV7 388 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 SETD3Q86TU7 594 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MAB21L3Q8N8X9 362 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 TADA1Q96BN2 335 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF599Q96NL3 588 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 EPN3Q9H201 632 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 HCFC1R1Q9NWW0 138 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 SAMD15Q9P1V8 674 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 SOX13Q9UN79 622 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 TBC1D30Q9Y2I9 924 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
SSBP3-203ENST00000371319 MIA3Q5JRA6 1907 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 A0A1W2PRU2 124 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ILVBLA1L0T0 632 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 SCAMP3O14828 347 aaKnown RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 PRPF4O43172 522 aaKnown RBP eCLIP17.81■□□□□ 0.445e-6■■■■□ 19.4
SSBP3-203ENST00000371319 KDELR3O43731 214 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 SPAG7O75391 227 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 PMPCBO75439 489 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 RB1P06400 928 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 POLBP06746 335 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF177Q13360 481 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 FRG1Q14331 258 aaKnown RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 STXBP5Q5T5C0 1151 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 FAM109BQ6ICB4 259 aaPredicted RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 CXorf57Q6NSI4 855 aaKnown RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 MARK2Q7KZI7 788 aaKnown RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 TMEM135Q86UB9 458 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 C4orf33Q8N1A6 199 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ANKRD42Q8N9B4 389 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ARRDC2Q8TBH0 407 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 SMC6Q96SB8 1091 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 IL22Q9GZX6 179 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 SSU72Q9NP77 194 aaKnown RBP17.81■□□□□ 0.44
SSBP3-203ENST00000371319 ASAH2Q9NR71 780 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 RPS6KL1Q9Y6S9 549 aa17.81■□□□□ 0.44
SSBP3-203ENST00000371319 TRAV19A0A0A6YYK7 116 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ZCWPW2A0A1B0GU75 182 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 FAM237BA0A1B0GVD1 139 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ATP9BO43861 1147 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 LPXNO60711 386 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
SSBP3-203ENST00000371319 USP1O94782 785 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ETFBP38117 255 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 CCR2P41597 374 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 NUMBP49757 651 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 SEC24CP53992 1094 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 EPHA5P54756 1037 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 WNT3AP56704 352 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 DMTNQ08495 405 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ANKRD20A4Q4UJ75 823 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 RANBP10Q6VN20 620 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 RTL10Q7L3V2 364 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 MGARPQ8TDB4 240 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 MICAL1Q8TDZ2 1067 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ZNF669Q96BR6 464 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-203ENST00000371319 GCNAQ96QF7 691 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ACE2Q9BYF1 805 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-203ENST00000371319 RABEP2Q9H5N1 569 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 CCDC134Q9H6E4 229 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 ATP13A1Q9HD20 1204 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 PPANQ9NQ55 473 aaKnown RBP17.8■□□□□ 0.44
SSBP3-203ENST00000371319 MAN1C1Q9NR34 630 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 SMG5Q9UPR3 1016 aaKnown RBP17.8■□□□□ 0.44
SSBP3-203ENST00000371319 FAM169AQ9Y6X4 670 aa17.8■□□□□ 0.44
SSBP3-203ENST00000371319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-203ENST00000371319 MAGEB16A2A368 324 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 MUSKO15146 869 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 TYROBPO43914 113 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 TBL1XO60907 577 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 RFPL2O75678 378 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 C1RP00736 705 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 EPCAMP16422 314 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 PFKLP17858 780 aa17.79■□□□□ 0.44
SSBP3-203ENST00000371319 GLDCP23378 1020 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms