RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ZBTB10Q96DT7 871 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 NXF3Q9H4D5 531 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 PAPOLBQ9NRJ5 636 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 VPS45Q9NRW7 570 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 DDX28Q9NUL7 540 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 OPTCQ9UBM4 332 aa12.01□□□□□ -0.49
DEPDC1-201ENST00000370966 SMIM28A0A1B0GU29 152 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 RGS14O43566 566 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 CPSF4O95639 269 aaKnown RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 DGKAP23743 735 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SERPINA4P29622 427 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 GRIA4P48058 902 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 POU5F1Q01860 360 aaKnown RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 CDC16Q13042 620 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 LIPMQ5VYY2 423 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 MON1AQ86VX9 555 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 ATG16L2Q8NAA4 619 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 B4GALNT2Q8NHY0 566 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 RP9Q8TA86 221 aaKnown RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 TRAPPC9Q96Q05 1148 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SEPHS2Q99611 448 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM126AQ9BYI3 521 aaPredicted RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 ALG9Q9H6U8 611 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SEC22BO75396 215 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 PTPN9P43378 593 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 NOMO2Q5JPE7 1267 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 PRAMEF19Q5SWL8 479 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 DEPDC1Q5TB30 811 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 NAIF1Q69YI7 327 aaPredicted RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 ERAP2Q6P179 960 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 DEFB128Q7Z7B8 93 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 OOSP2Q86WS3 158 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 STARD8Q92502 1023 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 CPT1BQ92523 772 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 RHOJQ9H4E5 214 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SNX15Q9NRS6 342 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 BTBD7Q9P203 1132 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM50BQ9Y247 325 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 COX4I1P13073 169 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 CHRNB2P17787 502 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 TFEBP19484 476 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 LRPAP1P30533 357 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 CHI3L1P36222 383 aaPredicted RBP12□□□□□ -0.49
DEPDC1-201ENST00000370966 TTPAP49638 278 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 NCALDP61601 193 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 CYP1B1Q16678 543 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM110CQ1W6H9 321 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 NKX2-3Q8TAU0 364 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SEMA3CQ99985 751 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 TRMOQ9BU70 441 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 STK39Q9UEW8 545 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 LGALS13Q9UHV8 139 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 SPACA6W5XKT8 324 aa12□□□□□ -0.49
DEPDC1-201ENST00000370966 AGPSO00116 658 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ADCY6O43306 1168 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 BPGMP07738 259 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 TUSC3Q13454 348 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SQLEQ14534 574 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PFKFB4Q16877 469 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PPP1R15BQ5SWA1 713 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 TDRPQ86YL5 185 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ZNF112Q9UJU3 913 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PARP4Q9UKK3 1724 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 AVILO75366 819 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PIAS1O75925 651 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MLYCDO95822 493 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 KRT8P05787 483 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ITGB6P18564 788 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SERPINB1P30740 379 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC25A3Q00325 362 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 TEX44Q53QW1 395 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 ARMC6Q6NXE6 501 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CYP4Z1Q86W10 505 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 EID3Q8N140 333 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 DHRSXQ8N5I4 330 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PTGR2Q8N8N7 351 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 TLCD1Q96CP7 247 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MAGED4Q96JG8 741 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MLPHQ9BV36 600 aaPredicted RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SSU72Q9NP77 194 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 DOLKQ9UPQ8 538 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MYRFQ9Y2G1 1151 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 IPPQ9Y573 584 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PCDHA2Q9Y5H9 948 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CSH1P0DML2 217 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CSH2P0DML3 217 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CES1P23141 567 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 PTGIRP43119 386 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 SPIRE1Q08AE8 756 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 CYP2R1Q6VVX0 501 aa11.99□□□□□ -0.49
DEPDC1-201ENST00000370966 DAW1Q8N136 415 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms