RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NR2C2P49116 596 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 PDK1Q15118 436 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 HNRNPA1L2Q32P51 320 aaKnown RBP14.15□□□□□ -0.14
TPM3-211ENST00000368531 SYT10Q6XYQ8 523 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 SLC13A5Q86YT5 568 aaPredicted RBP14.15□□□□□ -0.14
TPM3-211ENST00000368531 STK40Q8N2I9 435 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 PGBD3Q8N328 593 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 COG1Q8WTW3 980 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 FRS2Q8WU20 508 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 NSMCE1Q8WV22 266 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 PTPRN2Q92932 1015 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 HDAC11Q96DB2 347 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 MS4A14Q96JA4 679 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 EXOC2Q96KP1 924 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 C16orf45Q96MC5 204 aaPredicted RBP14.15□□□□□ -0.14
TPM3-211ENST00000368531 OSBPL9Q96SU4 736 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 NAPGQ99747 312 aaPredicted RBP14.15□□□□□ -0.14
TPM3-211ENST00000368531 SLC6A17Q9H1V8 727 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 POLMQ9NP87 494 aaPredicted RBP14.15□□□□□ -0.14
TPM3-211ENST00000368531 PRSS16Q9NQE7 514 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 SEPT10Q9P0V9 454 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 A0A1W2PQF6 199 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CTAGE9A4FU28 777 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 APOC4-APOC2K7ER74 178 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 KCNK1O00180 336 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 PPP1R12AO14974 1030 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 ZNF185O15231 689 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 ZBTB24O43167 697 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 NEBLO76041 1014 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 APOC2P02655 101 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 FGGP02679 453 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CCNCP24863 283 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CASQ1P31415 396 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 RECQLP46063 649 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 CCR3P51677 355 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CLCN6P51797 869 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 DGKEP52429 567 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 EIF3EP60228 445 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 RHOAP61586 193 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 PPIDQ08752 370 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 LBRQ14739 615 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 LONRF2Q1L5Z9 754 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 ATXN7L2Q5T6C5 722 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 C9orf64Q5T6V5 341 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 TMCO4Q5TGY1 634 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 HEATR6Q6AI08 1181 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 ANO7Q6IWH7 933 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 TIGD7Q6NT04 549 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 BZW1Q7L1Q6 419 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 LRRC49Q8IUZ0 686 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 C1orf210Q8IVY1 113 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CCDC13Q8IYE1 715 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.14□□□□□ -0.15
TPM3-211ENST00000368531 KDM1BQ8NB78 822 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 TSTD1Q8NFU3 115 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 OR6K2Q8NGY2 324 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 TFB1MQ8WVM0 346 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 HMGB4Q8WW32 186 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 PBKQ96KB5 322 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 OLFM3Q96PB7 478 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 IER2Q9BTL4 223 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 CINPQ9BW66 212 aaPredicted RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 CEP41Q9BYV8 373 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 BCCIPQ9P287 314 aaKnown RBP eCLIP14.14□□□□□ -0.15
TPM3-211ENST00000368531 SNX12Q9UMY4 172 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 R3HDM2Q9Y2K5 976 aaKnown RBP14.14□□□□□ -0.15
TPM3-211ENST00000368531 VCANP13611 3396 aa14.14□□□□□ -0.15
TPM3-211ENST00000368531 ANKRD36A6QL64 1941 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 TARSL2A2RTX5 802 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 ZNF821O75541 412 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 PEX11BO96011 259 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 CCNB1P14635 433 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 DEKP35659 375 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 MMP13P45452 471 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 VASPP50552 380 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 ETF1P62495 437 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 CSTF1Q05048 431 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 ITKQ08881 620 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 KLF1Q13351 362 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 CAMK2GQ13555 558 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 SNX1Q13596 522 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 ZNF235Q14590 738 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 NOMO1Q15155 1222 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 POM121L1PQ3SYA9 428 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 INO80DQ53TQ3 878 aaPredicted RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 CARD16Q5EG05 197 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 MARC1Q5VT66 337 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 DARS2Q6PI48 645 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 KIAA1324Q6UXG2 1013 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 PCDH20Q8N6Y1 951 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 TSEN2Q8NCE0 465 aaKnown RBP14.13□□□□□ -0.15
TPM3-211ENST00000368531 CHST14Q8NCH0 376 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 C1orf54Q8WWF1 131 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 CASKIN2Q8WXE0 1202 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 ATG4AQ8WYN0 398 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 TSGA13Q96PP4 275 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
TPM3-211ENST00000368531 NT5MQ9NPB1 228 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms