RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZNF806P0C7X5 589 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 C5AR1P21730 350 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 AMPD1P23109 780 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 IL4RP24394 825 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 DRD3P35462 400 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 CYLC1P35663 651 aaPredicted RBP22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 SSR1P43307 286 aaKnown RBP22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 CSRP2Q16527 193 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 HADHQ16836 314 aaKnown RBP22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 LYSMD4Q5XG99 296 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 RAD9BQ6WBX8 426 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 CYP2U1Q7Z449 544 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 TP53INP2Q8IXH6 220 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 NETO2Q8NC67 525 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 CHST14Q8NCH0 376 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 HSPA12BQ96MM6 686 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 NEUROG2Q9H2A3 272 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 DONSONQ9NYP3 566 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 HPCAL4Q9UM19 191 aa22.88■■□□□ 1.25
ECHDC1-203ENST00000368291 NDUFA10O95299 355 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 ARL4AP40617 200 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 ARHGAP25P42331 645 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 CDH6P55285 790 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 SF3A2Q15428 464 aaKnown RBP22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 PEAR1Q5VY43 1037 aaPredicted RBP22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 DPY19L3Q6ZPD9 716 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 GPR161Q8N6U8 529 aaKnown RBP22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 PCDH20Q8N6Y1 951 aaKnown RBP22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 CADM4Q8NFZ8 388 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 PIP4K2CQ8TBX8 421 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 FAM131CQ96AQ9 280 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 VOPP1Q96AW1 172 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 ISG20Q96AZ6 181 aaKnown RBP22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 BTBD1Q9H0C5 482 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 PDFQ9HBH1 243 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 PILRBQ9UKJ0 227 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 LAMA1P25391 3075 aa22.87■■□□□ 1.25
ECHDC1-203ENST00000368291 DMXL1Q9Y485 3027 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 ANKRD36A6QL64 1941 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 ZSCAN5CA6NGD5 496 aaPredicted RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 BUB1O43683 1085 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 PLXNA2O75051 1894 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 CHRNA3P32297 505 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 GJC1P36383 396 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 HADHBP55084 474 aaKnown RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 GEMIN4P57678 1058 aaKnown RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 MMRN1Q13201 1228 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 PRR23CQ6ZRP0 262 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 DSG4Q86SJ6 1040 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 SYT12Q8IV01 421 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 HDDC3Q8N4P3 179 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 PIGKQ92643 395 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 C6orf106Q9H6K1 298 aaPredicted RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 SGK2Q9HBY8 427 aa22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 REXO2Q9Y3B8 237 aaKnown RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.86■■□□□ 1.25
ECHDC1-203ENST00000368291 ATXN2Q99700 1313 aaKnown RBP22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 METTL12A8MUP2 240 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 PATE3B3GLJ2 98 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 C10orf142B7Z368 130 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 J3KR12 359 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 PLK4O00444 970 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 RNASEH2AO75792 299 aaKnown RBP22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 PAPOLAP51003 745 aaKnown RBP22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 CARD16Q5EG05 197 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 TCEAL6Q6IPX3 200 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 ZNF354CQ86Y25 554 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 PLPP6Q8IY26 295 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 TCEAL3Q969E4 200 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 CCDC114Q96M63 670 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 TM6SF2Q9BZW4 377 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 VPS45Q9NRW7 570 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 KLHL11Q9NVR0 708 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 FZD4Q9ULV1 537 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 NCKAP1Q9Y2A7 1128 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 WASF2Q9Y6W5 498 aa22.85■■□□□ 1.25
ECHDC1-203ENST00000368291 RCCD1A6NED2 376 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 ARHGAP42A6NI28 874 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 TMCC1O94876 653 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 SEMA4FO95754 770 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 DPYSL3Q14195 570 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 SPA17Q15506 151 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 POM121L1PQ3SYA9 428 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 INO80DQ53TQ3 878 aaPredicted RBP22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 ARHGAP36Q6ZRI8 547 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 LZTR1Q8N653 840 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 TMIEQ8NEW7 156 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 GANCQ8TET4 914 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 DNASE2BQ8WZ79 361 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 FOXJ1Q92949 421 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 BAG1Q99933 345 aaPredicted RBP22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 OMDQ99983 421 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 PCED1AQ9H1Q7 454 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 RCOR3Q9P2K3 495 aaPredicted RBP22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 SALL4Q9UJQ4 1053 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 FARP1Q9Y4F1 1045 aaPredicted RBP22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 PCDH15Q96QU1 1955 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 CACNA1EQ15878 2313 aa22.84■■□□□ 1.25
ECHDC1-203ENST00000368291 C1QTNF3-AMACRE9PGA6 284 aa22.83■■□□□ 1.25
ECHDC1-203ENST00000368291 PRAMEF11O60813 436 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms