RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SEMA4FO95754 770 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CD160O95971 181 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 SERPINF2P08697 491 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 H2AFZP0C0S5 128 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 GNSP15586 552 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 MAOBP27338 520 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CHRNA3P32297 505 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 ACVRL1P37023 503 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 RECQLP46063 649 aaPredicted RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 LIMK1P53667 647 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 GEMIN4P57678 1058 aaKnown RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 ARF5P84085 180 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CA9Q16790 459 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 TRIM61Q5EBN2 209 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CARD16Q5EG05 197 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 Q6ZVU0 165 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 H2AFVQ71UI9 128 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 GAS2L3Q86XJ1 694 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 NIPA2Q8N8Q9 360 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CTNNBL1Q8WYA6 563 aaPredicted RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 ISG20Q96AZ6 181 aaKnown RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 PEBP4Q96S96 227 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 RTKNQ9BST9 563 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 SNRNP25Q9BV90 132 aaKnown RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 CEP44Q9C0F1 390 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 C6orf106Q9H6K1 298 aaPredicted RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 NOL6Q9H6R4 1146 aaKnown RBP10.06□□□□□ -0.8
CD48-202ENST00000368046 RXFP3Q9NSD7 469 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 SUSD2Q9UGT4 822 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 SARDHQ9UL12 918 aa10.06□□□□□ -0.8
CD48-202ENST00000368046 A0A1B0GTW7 788 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 A0A1W2PP55 124 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 LRRC72A6NJI9 287 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 MEI4A8MW99 385 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 RASA4BC9J798 803 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 C1QTNF3-AMACRE9PGA6 284 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 SLC30A4O14863 429 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 RASA4O43374 803 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 BNIP3LO60238 219 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ZNF821O75541 412 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 RARAP10276 462 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 PSMD8P48556 350 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 SERPINH1P50454 418 aaKnown RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 NDST2P52849 883 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 TPI1P60174 286 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 CCDC15Q0P6D6 951 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 PARP15Q460N3 678 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 INO80DQ53TQ3 878 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 KCNT1Q5JUK3 1230 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 STPG1Q5TH74 334 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 TCEAL6Q6IPX3 200 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 CYP4V2Q6ZWL3 525 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 ZNF354CQ86Y25 554 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 AADATQ8N5Z0 425 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 PCDH20Q8N6Y1 951 aaKnown RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 OR2T34Q8NGX1 318 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 PIP4K2CQ8TBX8 421 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 TCEAL3Q969E4 200 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 FAM131CQ96AQ9 280 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ZNF775Q96BV0 537 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 BIRC7Q96CA5 298 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ARHGEF26Q96DR7 871 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 HEPHQ9BQS7 1158 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ANP32EQ9BTT0 268 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 KDM4CQ9H3R0 1056 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 GPATCH2LQ9NWQ4 482 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 CTTNBP2NLQ9P2B4 639 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 SERGEFQ9UGK8 458 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 EIF2B4Q9UI10 523 aaKnown RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 ANAPC7Q9UJX3 599 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.05□□□□□ -0.8
CD48-202ENST00000368046 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3DA0A087WVF3 549 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3IA0A087WXS9 549 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3EA0A087X179 549 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3KA0A087X1G2 549 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 LNP1A1A4G5 178 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3FA6NER0 549 aaPredicted RBP10.04□□□□□ -0.8
CD48-202ENST00000368046 C4orf47A7E2U8 309 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 TBC1D3LB9A6J9 549 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
CD48-202ENST00000368046 TM4SF5O14894 197 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 SLC7A4O43246 635 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 BUB1O43683 1085 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 PRNPP04156 253 aa10.04□□□□□ -0.8
CD48-202ENST00000368046 CFIP05156 583 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms