RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FASTKD1Q53R41 847 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 FAM182AQ5T1J6 154 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 C16orf59Q7L2K0 433 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 UNC5BQ8IZJ1 945 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
USF1-202ENST00000368020 TOP1MTQ969P6 601 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 NSL1Q96IY1 281 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 BTN2A3PQ96KV6 586 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 TSNARE1Q96NA8 513 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 FCRL3Q96P31 734 aaPredicted RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 CDK5RAP1Q96SZ6 601 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 TACO1Q9BSH4 297 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 FSD1LQ9BXM9 530 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 TLE6Q9H808 572 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 PIH1D1Q9NWS0 290 aaKnown RBP14.25□□□□□ -0.13
USF1-202ENST00000368020 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 HAO1Q9UJM8 370 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 SNX10Q9Y5X0 201 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 PSAT1Q9Y617 370 aa14.25□□□□□ -0.13
USF1-202ENST00000368020 ATP9BO43861 1147 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 USP12O75317 370 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 FGBP02675 491 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 PROCP04070 461 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 MYL4P12829 197 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 YWHAQP27348 245 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 RENBPP51606 427 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 HNRNPDQ14103 355 aaKnown RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 TRIP4Q15650 581 aaPredicted RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 CTC1Q2NKJ3 1217 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 CERCAMQ5T4B2 595 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 MBLAC2Q68D91 279 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 FSTL4Q6MZW2 842 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 PKN3Q6P5Z2 889 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 CNTN4Q8IWV2 1026 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 ARHGAP24Q8N264 748 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 DCLK2Q8N568 766 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 CNTD1Q8N815 330 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 RDH11Q8TC12 318 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 NSMCE1Q8WV22 266 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 TMEM175Q9BSA9 504 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 MECRQ9BV79 373 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 ZYG11BQ9C0D3 744 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 SLC39A8Q9C0K1 460 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 NMUR1Q9HB89 426 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 TMEM248Q9NWD8 314 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 COPG2Q9UBF2 871 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 HBS1LQ9Y450 684 aaKnown RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 HS3ST4Q9Y661 456 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 GREB1Q4ZG55 1949 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 MSI1O43347 362 aaKnown RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 ALDH2P05091 517 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 T-ENOLP0DO92 83 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 ACRP10323 421 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 COL6A2P12110 1019 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 SERPINB3P29508 390 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 RING1Q06587 406 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.135e-7■■■■□ 21.8
USF1-202ENST00000368020 ARID3BQ8IVW6 561 aaPredicted RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 KIF2BQ8N4N8 673 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 CFAP61Q8NHU2 1237 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 PIWIL2Q8TC59 973 aaKnown RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 CASD1Q96PB1 797 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 LBHD1Q9BQE6 289 aaPredicted RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 UBE2OQ9C0C9 1292 aaKnown RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 RHOJQ9H4E5 214 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 STK38LQ9Y2H1 464 aa14.24□□□□□ -0.13
USF1-202ENST00000368020 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
USF1-202ENST00000368020 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 TMEM114B3SHH9 223 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 F8W810 466 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 OR4Q2P0C623 313 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 FGFR3P22607 806 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 HK2P52789 917 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 WDR5P61964 334 aaKnown RBP14.23□□□□□ -0.13
USF1-202ENST00000368020 RPL10AP62906 217 aaKnown RBP14.23□□□□□ -0.13
USF1-202ENST00000368020 TNK2Q07912 1038 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 PCLAFQ15004 111 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 HSP90AA5PQ58FG0 334 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 TMEM240Q5SV17 173 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 FBXO32Q969P5 355 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 SLC7A6OSQ96CW6 309 aaPredicted RBP14.23□□□□□ -0.13
USF1-202ENST00000368020 MFSD3Q96ES6 412 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 VPS39Q96JC1 886 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 GPR22Q99680 433 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 FAM167BQ9BTA0 163 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 MCMBPQ9BTE3 642 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 SLC25A51Q9H1U9 297 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 MMADHCQ9H3L0 296 aaPredicted RBP14.23□□□□□ -0.13
USF1-202ENST00000368020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.23□□□□□ -0.13
USF1-202ENST00000368020 RBM22Q9NW64 420 aaKnown RBP eCLIP14.23□□□□□ -0.13
USF1-202ENST00000368020 IPO11Q9UI26 975 aaKnown RBP14.23□□□□□ -0.13
USF1-202ENST00000368020 EMCNQ9ULC0 261 aa14.23□□□□□ -0.13
USF1-202ENST00000368020 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 B4GALT3O60512 393 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 SIN3BO75182 1162 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms