RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 BANF1O75531 89 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 ZMPSTE24O75844 475 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 NFKB1P19838 968 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 FDFT1P37268 417 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 AVPR1AP37288 418 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 IFNAR2P48551 515 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 PMS2P54278 862 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 BASP1P80723 227 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 IL10RBQ08334 325 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 ZNF177Q13360 481 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 HNRNPDQ14103 355 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 SLMAPQ14BN4 828 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 FASTKD3Q14CZ7 662 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 POLD3Q15054 466 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 LRIT3Q3SXY7 679 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 SPDYCQ5MJ68 293 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 TTC39BQ5VTQ0 682 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 FYB2Q5VWT5 728 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 PID1Q7Z2X4 250 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 SETD3Q86TU7 594 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 IGDCC3Q8IVU1 814 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 TDRD5Q8NAT2 981 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 HJURPQ8NCD3 748 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 USP33Q8TEY7 942 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 EXOC4Q96A65 974 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 OXNAD1Q96HP4 312 aaPredicted RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 AGAP3Q96P47 875 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTA1-201ENST00000367621 PHACTR1Q9C0D0 580 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 MAGEH1Q9H213 219 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 GBA3Q9H227 469 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 CDC42EP4Q9H3Q1 356 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 PLAC1Q9HBJ0 212 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 NINJ2Q9NZG7 142 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 ZMYM5Q9UJ78 669 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 LSM7Q9UK45 103 aaKnown RBP9.68□□□□□ -0.86
VTA1-201ENST00000367621 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 NOTCH4Q99466 2003 aa9.68□□□□□ -0.86
VTA1-201ENST00000367621 NDC80O14777 642 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 MUSKO15146 869 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 SIAH2O43255 324 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 RIPK2O43353 540 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 KDELR3O43731 214 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 AVILO75366 819 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 STK10O94804 968 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 SUN1O94901 812 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 LUC7L3O95232 432 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 CD160O95971 181 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 PENKP01210 267 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 HLA-DQB2P05538 268 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 APRTP07741 180 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 POU3F3P20264 500 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 GLDCP23378 1020 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 FSHRP23945 695 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 MZF1P28698 734 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 LTBRP36941 435 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 MAGEA4P43358 317 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 DLX2Q07687 328 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 NIPAL4Q0D2K0 466 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 SLC10A7Q0GE19 358 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 OLIG2Q13516 323 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 GRIN2CQ14957 1233 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 KYNUQ16719 465 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 FAM78AQ5JUQ0 283 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 MPP7Q5T2T1 576 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 C6orf118Q5T5N4 469 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 ALS2CLQ60I27 953 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 LEKR1Q6ZMV7 388 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 TRMT10CQ7L0Y3 403 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 PRPF39Q86UA1 669 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 CCDC25Q86WR0 208 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 TMEM25Q86YD3 366 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 PGBD5Q8N414 524 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 TADA1Q96BN2 335 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 SERPINB12Q96P63 405 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 ZIM3Q96PE6 472 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 FCRL5Q96RD9 977 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 APOL5Q9BWW9 433 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 TSPYL1Q9H0U9 437 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 PABPC3Q9H361 631 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 PIDD1Q9HB75 910 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 GLOD4Q9HC38 313 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 EIF2B3Q9NR50 452 aaKnown RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 RBM22Q9NW64 420 aaKnown RBP eCLIP9.67□□□□□ -0.86
VTA1-201ENST00000367621 LMCD1Q9NZU5 365 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 KLHL8Q9P2G9 620 aaPredicted RBP9.67□□□□□ -0.86
VTA1-201ENST00000367621 ACTL7AQ9Y615 435 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 MTCH2Q9Y6C9 303 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 CDH23Q9H251 3354 aa9.67□□□□□ -0.86
VTA1-201ENST00000367621 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
VTA1-201ENST00000367621 EIF3HO15372 352 aaKnown RBP eCLIP9.66□□□□□ -0.86
VTA1-201ENST00000367621 AP2A1O95782 977 aa9.66□□□□□ -0.86
VTA1-201ENST00000367621 TTC4O95801 387 aa9.66□□□□□ -0.86
VTA1-201ENST00000367621 SYF2O95926 243 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms