RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PDLIM1O00151 329 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MED26O95402 600 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 CCDC166P0CW27 439 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 CYP2A13Q16696 494 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 GOLGA7BQ2TAP0 167 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 C6orf10Q5SRN2 563 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PDSS1Q5T2R2 415 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TXNRD3Q86VQ6 643 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 NPAS4Q8IUM7 802 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ADGRF2Q8IZF7 708 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DGCR14Q96DF8 476 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 C17orf62Q9BQA9 187 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TTPALQ9BTX7 342 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 CELF4Q9BZC1 486 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ERVK-11Q9UQG0 969 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 GPSM3Q9Y4H4 160 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 CDY2AQ9Y6F7 541 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 INPPL1O15357 1258 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PEX1O43933 1283 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 EYA4O95677 639 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 BCL10O95999 233 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PDGFRAP16234 1089 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 IFNAR1P17181 557 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PDK1Q15118 436 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MINDY4Q4G0A6 757 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 C12orf60Q5U649 245 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TTI2Q6NXR4 508 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 IFNEQ86WN2 208 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 KBTBD2Q8IY47 623 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DEFB123Q8N688 67 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF614Q8N883 585 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ATP6V1C2Q8NEY4 427 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DQX1Q8TE96 717 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 RAD9AQ99638 391 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PLA2G12BQ9BX93 195 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ACE2Q9BYF1 805 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MCOLN1Q9GZU1 580 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 RETREG1Q9H6L5 497 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DCLRE1BQ9H816 532 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ABHD10Q9NUJ1 306 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 FAM153AQ9UHL3 310 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 H7C1Q1 480 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 KHNYNO15037 678 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 AOC2O75106 756 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 VPS26AO75436 327 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 SMPD1P17405 629 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 EIF2S3P41091 472 aaKnown RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 BEX3Q00994 111 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ELP6Q0PNE2 266 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ITPK1Q13572 414 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 NFIL3Q16649 462 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ANKDD1AQ495B1 522 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 CLVS2Q5SYC1 327 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PLA2G4FQ68DD2 849 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 SLC24A5Q71RS6 500 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 FOXRED2Q8IWF2 684 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 HJURPQ8NCD3 748 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TRIM43Q96BQ3 446 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 LENG1Q96BZ8 264 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MAGED4Q96JG8 741 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 GAL3ST1Q99999 423 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 MND1Q9BWT6 205 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 PACSIN1Q9BY11 444 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 C8orf33Q9H7E9 229 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 SMPD4Q9NXE4 827 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 KLK14Q9P0G3 267 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 TTC7AQ9ULT0 858 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-206ENST00000367253 ADGRA2Q96PE1 1338 aa8.75□□□□□ -1.01
SYNE1-206ENST00000367253 FPGTO14772 594 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PSTPIP1O43586 416 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CRTAMO95727 393 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 AGR2O95994 175 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ABCB1P08183 1280 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CLCA4Q14CN2 919 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF852Q6ZMS4 543 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 LINC00301Q8NCQ3 95 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FAM45AQ8TCE6 357 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 WFIKKN2Q8TEU8 576 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 KCNJ9Q92806 393 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CLP1Q92989 425 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 DCUN1D5Q9BTE7 237 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CLPBQ9H078 707 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 NSUN3Q9H649 340 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 WDCPQ9H6R7 721 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FBRSL1Q9HCM7 1045 aaKnown RBP8.74□□□□□ -1.01
SYNE1-206ENST00000367253 PREBQ9HCU5 417 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 KCNH7Q9NS40 1196 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 IMPAD1Q9NX62 359 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ARL15Q9NXU5 204 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CLIC5Q9NZA1 410 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 ADGRA3Q8IWK6 1321 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 CPED1A4D0V7 1026 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 H0YJX3 145 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 AIM2O14862 343 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 OGTO15294 1046 aa8.74□□□□□ -1.01
SYNE1-206ENST00000367253 FKBP9O95302 570 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms