RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 RPTORQ8N122 1335 aa15.91■□□□□ 0.14
NUCKS1-201ENST00000367142 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 CACNB4O00305 520 aaPredicted RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 CDC42P60953 191 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 STXBP5Q5T5C0 1151 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 UNC93AQ86WB7 457 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 REXO1L1PQ8IX06 675 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 EEF1AKMT1Q8WVE0 214 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 SLC5A5Q92911 643 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 SEMA4BQ9NPR2 832 aaPredicted RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 CLPTM1O96005 669 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 DNTTP04053 509 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 TPP2P29144 1249 aaPredicted RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 FRG1Q14331 258 aaKnown RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 PCID2Q5JVF3 399 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 KLHL17Q6TDP4 642 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 EIF3MQ7L2H7 374 aaKnown RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 SLC9A7Q96T83 725 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 SLC25A23Q9BV35 468 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ZNF510Q9Y2H8 683 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 NEXMIFQ5QGS0 1516 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 NOMO2Q5JPE7 1267 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ALKBH2Q6NS38 261 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 CDH9Q9ULB4 789 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 GSTK1Q9Y2Q3 226 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 IL1BP01584 269 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ARMC8Q8IUR7 673 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 STAG3L4Q8TBR4 150 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 WNT8BQ93098 351 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 MIEF2Q96C03 454 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 DCLRE1BQ9H816 532 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ZNF304Q9HCX3 659 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ADH1CP00326 375 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 EPORP19235 508 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 NOS2P35228 1153 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 C9orf16Q9BUW7 83 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 ELL3Q9HB65 397 aaPredicted RBP15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 QRICH2Q9H0J4 1663 aa15.9■□□□□ 0.14
NUCKS1-201ENST00000367142 CCDC85CA6NKD9 419 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 TLL1O43897 1013 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 EIF4BP23588 611 aaKnown RBP15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 RARRES1P49788 294 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 SP3Q02447 781 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 LPIN1Q14693 890 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 IZUMO2Q6UXV1 221 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 DENND1CQ8IV53 801 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 ARHGEF19Q8IW93 802 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 HMG20AQ9NP66 347 aa15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 MRTO4Q9UKD2 239 aaKnown RBP15.89■□□□□ 0.14
NUCKS1-201ENST00000367142 PNMA8CA0A1B0GUJ8 204 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 ISM1B1AKI9 464 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 MCIDASD6RGH6 385 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 PHGDHO43175 533 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 HSPA14Q0VDF9 509 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 TAB1Q15750 504 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 STK32CQ86UX6 486 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 SNRNP27Q8WVK2 155 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 SLC15A5A6NIM6 579 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 BCL10O95999 233 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 PRG2P13727 222 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 TRAF3Q13114 568 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 HYIQ5T013 277 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 TTI2Q6NXR4 508 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 OR8D1Q8WZ84 308 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 PIH1D1Q9NWS0 290 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 TINF2Q9BSI4 451 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 MKL2Q9ULH7 1088 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 IQGAP3Q86VI3 1631 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 LTA4HP09960 611 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 SLC35G4P0C7Q5 338 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 RCVRNP35243 200 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 CD86P42081 329 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 DGUOKQ16854 277 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 SAMD4BQ5PRF9 694 aaKnown RBP15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 TEKT5Q96M29 485 aa15.89■□□□□ 0.13
NUCKS1-201ENST00000367142 KCNK1O00180 336 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 TRDMT1O14717 391 aaKnown RBP15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 CD44P16070 742 aaKnown RBP15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 KELP23276 732 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 CES3Q6UWW8 571 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 PROSER1Q86XN7 944 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 SLC38A2Q96QD8 506 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 RBM7Q9Y580 266 aaKnown RBP15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 SALL1Q9NSC2 1324 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 CLOCKO15516 846 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 SMIM10L2AP0DMW4 78 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 SMIM10L2BP0DMW5 78 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 SMIM11AP58511 58 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 MYBPC1Q00872 1141 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 TTC7BQ86TV6 843 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 CLCC1Q96S66 551 aa15.88■□□□□ 0.13
NUCKS1-201ENST00000367142 ZYG11BQ9C0D3 744 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms