RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 SLC17A7Q9P2U7 560 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 UBDO15205 165 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 FBXO21O94952 628 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CHCHD4Q8N4Q1 142 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF276Q8N554 614 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 SNX9Q9Y5X1 595 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 FOXD2O60548 495 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 TSPAN1O60635 241 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MCAMP43121 646 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CBR4Q8N4T8 237 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZCCHC9Q8N567 271 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MED15Q96RN5 788 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 SLC24A2Q9UI40 661 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 DYRK1BQ9Y463 629 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ATP7BP35670 1465 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 BNC1Q01954 994 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 FBXO42Q6P3S6 717 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PJA1Q8NG27 643 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM172AQ8WUF8 416 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PIH1D1Q9NWS0 290 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 FEM1BQ9UK73 627 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 GNEQ9Y223 722 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 WDR27A2RRH5 827 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CENPBD1B2RD01 187 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MSH3P20585 1137 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PGDP52209 483 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PTK6Q13882 451 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MTSS1LQ765P7 747 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 UQCC2Q9BRT2 126 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 BEX2Q9BXY8 128 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CATSPERBQ9H7T0 1116 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 UBA2Q9UBT2 640 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MYL12BO14950 172 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ARL3P36405 182 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 OR1G1P47890 313 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MARCKSL1P49006 195 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 SIK1P57059 783 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 TMEM143Q96AN5 459 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 RCN3Q96D15 328 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PRODHO43272 600 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PPM1BO75688 479 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PPP1R10Q96QC0 940 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 RBM7Q9Y580 266 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 DDX3YO15523 660 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CYP2C8P10632 490 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CHRNB1P11230 501 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLIP4Q8N3C7 705 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PI4K2AQ9BTU6 479 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MECRQ9BV79 373 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MXD3Q9BW11 206 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLTCL1P53675 1640 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CABIN1Q9Y6J0 2220 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 CLDN25C9JDP6 229 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 IFNA7P01567 189 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 ST14Q9Y5Y6 855 aa11.2□□□□□ -0.62
CDC42BPA-205ENST00000366769 A8MU76 341 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 SOAT2O75908 522 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PON1P27169 355 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 UBE3CQ15386 1083 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 TGFBIQ15582 683 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PDK4Q16654 411 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 DENND6BQ8NEG7 585 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 TOP1MTQ969P6 601 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ESPL1Q14674 2120 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PDGFRAP16234 1089 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 KCNA6P17658 529 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 OXCT1P55809 520 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PTPAQ15257 358 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 SHQ1Q6PI26 577 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 GALNT5Q7Z7M9 940 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 DSG4Q86SJ6 1040 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CCDC120Q96HB5 630 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 KATNAL1Q9BW62 490 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 NRKQ7Z2Y5 1582 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ZNF638Q14966 1978 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 PVALEFA0A1B0GWK0 134 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 SNAP91O60641 907 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 KHDRBS3O75525 346 aaKnown RBP11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 FGFR1P11362 822 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 ELK3P41970 407 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 CYP24A1Q07973 514 aa11.19□□□□□ -0.62
CDC42BPA-205ENST00000366769 FAM83EQ2M2I3 478 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms