RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ITGA2BP08514 1039 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 HOXC4P09017 264 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 RFPL3SP0C7P2 107 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 FRMD6-AS1P0C7T7 363 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CAPN2P17655 700 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 HDCP19113 662 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 HOXC8P31273 242 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 AARSP49588 968 aaKnown RBP eCLIP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 AGTR2P50052 363 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 BMXP51813 675 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 KIF23Q02241 960 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 TBL3Q12788 808 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 COX10Q12887 443 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 STK3Q13188 491 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAB1Q13480 694 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CBFBQ13951 182 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CTTNQ14247 550 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ACAP2Q15057 778 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 C15orf32Q32M92 178 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 UAP1L1Q3KQV9 507 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 TUBB8Q3ZCM7 444 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 SETMARQ53H47 684 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 C2orf83Q53S99 150 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 TAF1BQ53T94 588 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CCDC157Q569K6 752 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 NCAPH2Q6IBW4 605 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ERAP2Q6P179 960 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMEM71Q6P5X7 295 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ATF7IPQ6VMQ6 1270 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF783Q6ZMS7 281 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ADGRD2Q7Z7M1 963 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ADCK1Q86TW2 530 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 LRP11Q86VZ4 500 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 DHX37Q8IY37 1157 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZBED8Q8IZ13 594 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 Q8N377 158 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CCDC185Q8N715 623 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 NEXN-AS1Q8NBZ9 246 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 LSM14AQ8ND56 463 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 SRFBP1Q8NEF9 429 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 NFAM1Q8NET5 270 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CEP76Q8TAP6 659 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 STAMBPL1Q96FJ0 436 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 GPR78Q96P69 363 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 MGME1Q9BQP7 344 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 DDX23Q9BUQ8 820 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 SLC25A18Q9H1K4 315 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CHST8Q9H2A9 424 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMX1Q9H3N1 280 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 FAM83DQ9H4H8 585 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 PANK3Q9H999 370 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 UPF2Q9HAU5 1272 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 CLK4Q9HAZ1 481 aaKnown RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 PNPOQ9NVS9 261 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 KLHL8Q9P2G9 620 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF282Q9UDV7 671 aaPredicted RBP0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 SLC27A6Q9Y2P4 619 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 KIF25-AS1Q9Y6Z4 181 aa0.17□□□□□ -2.38
RNU6-54P-201ENST00000365563 MUC16Q8WXI7 14507 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TRBV5-7A0A0A0MS05 114 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 C11orf97A0A1B0GVM6 126 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 C17orf102A2RUQ5 167 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TRIM75PA6NK02 468 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMEM178BH3BS89 294 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 H3BUI4 141 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZSCAN9O15535 394 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 RRP9O43818 475 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 INMTO95050 263 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TPOP07202 933 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ACADMP11310 421 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 CDH1P12830 882 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 UNGP13051 313 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 UBA1P22314 1058 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 EDNRBP24530 442 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 USP8P40818 1118 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 PTDSS1P48651 473 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 CPT1AP50416 773 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 EFNA5P52803 228 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 COPAP53621 1224 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 UCNP55089 124 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 SQSTM1Q13501 440 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 BMS1Q14692 1282 aaKnown RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ELF2Q15723 593 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 MPEG1Q2M385 716 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 DCAF6Q58WW2 860 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 SOGA3Q5TF21 947 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 NSUN5P2Q63ZY6 315 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 GRHL2Q6ISB3 625 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 FAM53AQ6NSI3 398 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZCCHC12Q6PEW1 402 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 CCNI2Q6ZMN8 369 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 KIAA0907Q7Z7F0 614 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 HERC6Q8IVU3 1022 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZDHHC23Q8IYP9 409 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 POM121L12Q8N7R1 296 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 CMASQ8NFW8 434 aaPredicted RBP0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 GLMPQ8WWB7 406 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 HERVK_113Q902F9 699 aa0.16□□□□□ -2.38
RNU6-54P-201ENST00000365563 TANKQ92844 425 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms