RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 GAGE1Q13065 139 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 GAGE4Q13068 117 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CTTNQ14247 550 aaKnown RBP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CLUL1Q15846 466 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 C3orf36Q3SXR2 165 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 TUBB8Q3ZCM7 444 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CNNM4Q6P4Q7 775 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 NAA40Q86UY6 237 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 HERC6Q8IVU3 1022 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 DDX51Q8N8A6 666 aaKnown RBP eCLIP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CMASQ8NFW8 434 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CEP76Q8TAP6 659 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 ASB12Q8WXK4 309 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 ZDHHC12Q96GR4 267 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 TMEM19Q96HH6 336 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 REXO5Q96IC2 774 aaKnown RBP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 C3orf30Q96M34 536 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 DNAJC7Q99615 494 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 TMX1Q9H3N1 280 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 UPF2Q9HAU5 1272 aaKnown RBP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 PDFQ9HBH1 243 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 HCFC1R1Q9NWW0 138 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 C2orf42Q9NWW7 574 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 ABCF2Q9UG63 623 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 TUBE1Q9UJT0 475 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 RIMKLBQ9ULI2 386 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 KCNS2Q9ULS6 477 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 RAP2CQ9Y3L5 183 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 ZNF175Q9Y473 711 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 CFAP20Q9Y6A4 193 aaKnown RBP-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 ARID1AO14497 2285 aa-0.02□□□□□ -2.41
RNU6-478P-201ENST00000363904 A0A1W2PP11 408 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 LRRC14BA6NHZ5 514 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CCDC154A6NI56 674 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 IGHV3-13P01766 116 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 TFRCP02786 760 aaKnown RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 MYZAPP0CAP1 466 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 MATN1P21941 496 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 YY1P25490 414 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CHRNA5P30532 468 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 HOXC8P31273 242 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 SLC11A2P49281 568 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 HOXA1P49639 335 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 AGTR2P50052 363 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CPT1AP50416 773 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 ECT2LQ008S8 904 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 BMS1Q14692 1282 aaKnown RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 C2orf27AQ580R0 203 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 C10orf76Q5T2E6 689 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 AAGABQ6PD74 315 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 VITQ6UXI7 678 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CLEC9AQ6UXN8 241 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 ZNF852Q6ZMS4 543 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 KCTD8Q6ZWB6 473 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 SATL1Q86VE3 508 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 LRRTM3Q86VH5 581 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 IQCHQ86VS3 1027 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CCDC25Q86WR0 208 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 PPP1R3BQ86XI6 285 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 POM121L12Q8N7R1 296 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 TMEM163Q8TC26 289 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 RAPGEF4Q8WZA2 1011 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 TANKQ92844 425 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 LRRC1Q9BTT6 524 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 MS4A7Q9GZW8 240 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 PARLQ9H300 379 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 IL21RQ9HBE5 538 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 TNFRSF19Q9NS68 423 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 ZNF107Q9UII5 783 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 PAM16Q9Y3D7 125 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 PCDHA1Q9Y5I3 950 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 CDY1Q9Y6F8 540 aa-0.03□□□□□ -2.41
RNU6-478P-201ENST00000363904 hDV102S1A0JD36 115 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 ZNF587BE7ETH6 402 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 FAM227AF5H4B4 570 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 HTRA2O43464 458 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 CIDEAO60543 219 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 MELTFP08582 738 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 PARP1P09874 1014 aaKnown RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 RFPL3SP0C7P2 107 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 GP9P14770 177 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 ZNF17P17021 662 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 AGXTP21549 392 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 ACVR2AP27037 513 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 SLC6A12P48065 614 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 TERF1P54274 439 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 ZNF155Q12901 538 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 PABPC4Q13310 644 aaKnown RBP eCLIP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 PRR30Q53SZ7 412 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 C2CD6Q53TS8 623 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 HEATR3Q7Z4Q2 680 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 ADCK1Q86TW2 530 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 LYPD1Q8N2G4 141 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 PPM1KQ8N3J5 372 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 SLC15A4Q8N697 577 aa-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-478P-201ENST00000363904 JMYQ8N9B5 988 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms