RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
CCDC7-203ENST00000362006 FBXO10Q9UK96 956 aa18.37■□□□□ 0.53
CCDC7-203ENST00000362006 PPFIA2O75334 1257 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 ZMPSTE24O75844 475 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 FAM153BP0C7A2 387 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 NFKB1P19838 968 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 HSPA9P38646 679 aaKnown RBP18.36■□□□□ 0.53
CCDC7-203ENST00000362006 SMAD4Q13485 552 aaKnown RBP18.36■□□□□ 0.53
CCDC7-203ENST00000362006 ZNF235Q14590 738 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 PLEKHG6Q3KR16 790 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 FAM153CQ494X1 144 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 MYLIPQ8WY64 445 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 SLC25A51Q9H1U9 297 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 UBE2ZQ9H832 354 aaPredicted RBP18.36■□□□□ 0.53
CCDC7-203ENST00000362006 FAM153AQ9UHL3 310 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 CLEC4EQ9ULY5 219 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
CCDC7-203ENST00000362006 HLA-DQB2P05538 268 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 CES1P23141 567 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 ARL4CP56559 192 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 SULT2A1Q06520 285 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 CBLBQ13191 982 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 FAXCQ5TGI0 409 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 KLHDC8BQ8IXV7 354 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 CPA6Q8N4T0 437 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC7-203ENST00000362006 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC7-203ENST00000362006 CD70P32970 193 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 GEMP55040 296 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 ANKRD22Q5VYY1 191 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 PDIK1LQ8N165 341 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 MREGQ8N565 214 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 PSKH2Q96QS6 385 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 CINPQ9BW66 212 aaPredicted RBP18.35■□□□□ 0.53
CCDC7-203ENST00000362006 POLR1EQ9GZS1 481 aaKnown RBP18.35■□□□□ 0.53
CCDC7-203ENST00000362006 ECT2Q9H8V3 914 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 NT5MQ9NPB1 228 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 VPS51Q9UID3 782 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 GGA2Q9UJY4 613 aa18.35■□□□□ 0.53
CCDC7-203ENST00000362006 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 PABPC1P11940 636 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 HLA-FP30511 346 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 ARF5P84085 180 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 DHX9Q08211 1270 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 HIF1AQ16665 826 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 PITRM1Q5JRX3 1037 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 SPDYCQ5MJ68 293 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TRIM68Q6AZZ1 485 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 PARM1Q6UWI2 310 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 CENPUQ71F23 418 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 KIAA0907Q7Z7F0 614 aaPredicted RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 RELL1Q8IUW5 271 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 APCDD1Q8J025 514 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 ASIC4Q96FT7 647 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 EBF3Q9H4W6 596 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 XAB2Q9HCS7 855 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 AP3B1O00203 1094 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TMEM63AO94886 807 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 AP2A1O95782 977 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 MLNP12872 115 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 ARSAP15289 507 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 FOSL2P15408 326 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 KCNA5P22460 613 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 GLDCP23378 1020 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TNNT3P45378 269 aaPredicted RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 SKIV2LQ15477 1246 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TMC3Q7Z5M5 1100 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 AHI1Q8N157 1196 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 PDCD7Q8N8D1 485 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 WFIKKN2Q8TEU8 576 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 KXD1Q9BQD3 176 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TRMT61BQ9BVS5 477 aaKnown RBP18.34■□□□□ 0.53
CCDC7-203ENST00000362006 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 VPS45Q9NRW7 570 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 TTLL3Q9Y4R7 772 aa18.34■□□□□ 0.53
CCDC7-203ENST00000362006 BRWD1Q9NSI6 2320 aa18.33■□□□□ 0.53
CCDC7-203ENST00000362006 TCRBV7S3A2A0A539 114 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 ANHXE9PGG2 379 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 SNAP91O60641 907 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 SUN1O94901 812 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 ITKQ08881 620 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 MPP3Q13368 585 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 RUNX3Q13761 415 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 CCDC85BQ15834 202 aaPredicted RBP18.33■□□□□ 0.52
CCDC7-203ENST00000362006 ALG1LQ6GMV1 187 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 HDXQ7Z353 690 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 LINC00523Q86TU6 105 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 FGF14Q92915 247 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 IMP4Q96G21 291 aaKnown RBP18.33■□□□□ 0.52
CCDC7-203ENST00000362006 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCDC7-203ENST00000362006 PLA2G2FQ9BZM2 168 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 SLC27A6Q9Y2P4 619 aa18.33■□□□□ 0.52
CCDC7-203ENST00000362006 MBTPS2O43462 519 aa18.32■□□□□ 0.52
CCDC7-203ENST00000362006 DGKGP49619 791 aa18.32■□□□□ 0.52
CCDC7-203ENST00000362006 NSUN2Q08J23 767 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC7-203ENST00000362006 SLC14A2Q15849 920 aa18.32■□□□□ 0.52
CCDC7-203ENST00000362006 KCTD11Q693B1 232 aa18.32■□□□□ 0.52
CCDC7-203ENST00000362006 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms