RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 BTBD3Q9Y2F9 522 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 SNTNA6NMZ2 147 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 ADAMTS3O15072 1205 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 VTNP04004 478 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 POU1F1P28069 291 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 CCR3P51677 355 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 ANKS6Q68DC2 871 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 GALNT18Q6P9A2 607 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 PROSER1Q86XN7 944 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 SH3KBP1Q96B97 665 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 PORCNQ9H237 461 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 EPB41L1Q9H4G0 881 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 ZNRF3Q9ULT6 936 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
SMC5-201ENST00000361138 CHI3L1P36222 383 aaPredicted RBP14.13□□□□□ -0.15
SMC5-201ENST00000361138 PURAQ00577 322 aaKnown RBP14.13□□□□□ -0.15
SMC5-201ENST00000361138 SPIDRQ14159 915 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 EML3Q32P44 896 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 VPS45Q9NRW7 570 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 KRT84Q9NSB2 600 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 INVSQ9Y283 1065 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 COQ6Q9Y2Z9 468 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 AKAP12Q02952 1782 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 KIF1AQ12756 1690 aa14.13□□□□□ -0.15
SMC5-201ENST00000361138 KLHL33A6NCF5 533 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 C4BPBP20851 252 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 DEFB132Q7Z7B7 95 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 TMEM132CQ8N3T6 1108 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 AADATQ8N5Z0 425 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ARL10Q8N8L6 244 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 CMC1Q7Z7K0 106 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ZNF605Q86T29 641 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 OR2T34Q8NGX1 318 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 OR2T3Q8NH03 318 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 CAB39LQ9H9S4 337 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ENTPD7Q9NQZ7 604 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 LEF1Q9UJU2 399 aaPredicted RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 BBIP1A8MTZ0 92 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 GSSP48637 474 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SLC7A2P52569 658 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 DRICH1Q6PGQ1 229 aaPredicted RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 LRTOMTQ8WZ04 291 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 FOPNLQ96NB1 174 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SCUBE2Q9NQ36 999 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 TDRKHQ9Y2W6 561 aaKnown RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 TPSB2P20231 275 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ITGA7Q13683 1181 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 TSNQ15631 228 aaKnown RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 TPSAB1Q15661 275 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 TTLL9Q3SXZ7 439 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SLC7A8Q9UHI5 535 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 TMCC3Q9ULS5 477 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 AP3M1Q9Y2T2 418 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SNCAIPQ9Y6H5 919 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ERBB2P04626 1255 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 CAPN1P07384 714 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 ODC1P11926 461 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 RXRGP48443 463 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 KLHL17Q6TDP4 642 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 C11orf74Q86VG3 221 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 JOSD2Q8TAC2 188 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SEPT8Q92599 483 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 PANX3Q96QZ0 392 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 HGH1Q9BTY7 390 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 SEMA4BQ9NPR2 832 aaPredicted RBP14.12□□□□□ -0.15
SMC5-201ENST00000361138 FADS3Q9Y5Q0 445 aa14.12□□□□□ -0.15
SMC5-201ENST00000361138 CYP1A1P04798 512 aaPredicted RBP14.11□□□□□ -0.15
SMC5-201ENST00000361138 PPIL2Q13356 520 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 NADK2Q4G0N4 442 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 METTL21CQ5VZV1 264 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 UBR7Q8N806 425 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 ZHX1-C8orf76Q96EF9 292 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 TPD52L3Q96J77 140 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 TBCDQ9BTW9 1192 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 XPR1Q9UBH6 696 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 EGFL7Q9UHF1 273 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 CRLS1Q9UJA2 301 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 IL12AP29459 219 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 PDSS2Q86YH6 399 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 ERI1Q8IV48 349 aaKnown RBP14.11□□□□□ -0.15
SMC5-201ENST00000361138 ASB7Q9H672 318 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 C3orf18Q9UK00 162 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 FAM25AB3EWG3 89 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 FAM25CB3EWG5 89 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 FAM25GB3EWG6 89 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 ASLP04424 464 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 FAXDC2Q96IV6 333 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 HOPXQ9BPY8 73 aaPredicted RBP14.11□□□□□ -0.15
SMC5-201ENST00000361138 NUAK2Q9H093 628 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 HDHD2Q9H0R4 259 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 PPM1HQ9ULR3 514 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 NBNO60934 754 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 SLC25A27O95847 323 aa14.11□□□□□ -0.15
SMC5-201ENST00000361138 HNRNPLP14866 589 aaKnown RBP eCLIP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms