RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 L2HGDHQ9H9P8 463 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 THAP10Q9P2Z0 257 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 SLCO3A1Q9UIG8 710 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 PLA2G4CQ9UP65 541 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 TRIOO75962 3097 aa12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 MYO18AQ92614 2054 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-201ENST00000359683 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 ANTXRLA6NF34 631 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 MTSS1O43312 755 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 ATP9BO43861 1147 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 PHF2O75151 1096 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 CCNB1P14635 433 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 COILP38432 576 aaPredicted RBP12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 KCNJ1P48048 391 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 RENBPP51606 427 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 CLCN6P51797 869 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 SLC10A7Q0GE19 358 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 CCINQ13939 588 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 E2F5Q15329 346 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 CYTH1Q15438 398 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 TMCO4Q5TGY1 634 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 EMC10Q5UCC4 262 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 TTC27Q6P3X3 843 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 LEKR1Q6ZMV7 388 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 SIX5Q8N196 739 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 FBXL6Q8N531 539 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 SH2D3CQ8N5H7 860 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 HTR3CQ8WXA8 447 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-201ENST00000359683 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 K7ERQ8 282 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 KCNK1O00180 336 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 NPC1O15118 1278 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 JCHAINP01591 159 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CHRNB1P11230 501 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 SRCP12931 536 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CHRNA3P32297 505 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FNTAP49354 379 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 MRPS21P82921 87 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 WASHC5Q12768 1159 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FZD5Q13467 585 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ENPP2Q13822 863 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF234Q14588 700 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 LBRQ14739 615 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 MARC1Q5VT66 337 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 HEATR6Q6AI08 1181 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ATP11CQ8NB49 1132 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 RTP4Q96DX8 246 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 VAT1Q99536 393 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 TMEM121Q9BTD3 319 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 TMEM245Q9H330 911 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 RBM12Q9NTZ6 932 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 AMACRQ9UHK6 382 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 C5orf60A6NFR6 353 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 KCNN4O15554 427 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 TMCC1O94876 653 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 PTPN3P26045 913 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 NNMTP40261 264 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 LMNB2Q03252 620 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 DLG2Q15700 870 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 DGKKQ5KSL6 1271 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CCDC137Q6PK04 289 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ALLCQ8N6M5 410 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CNTD1Q8N815 330 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 MNS1Q8NEH6 495 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 USP33Q8TEY7 942 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FRS2Q8WU20 508 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 OSBPL6Q9BZF3 934 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 DDX47Q9H0S4 455 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 RBM22Q9NW64 420 aaKnown RBP eCLIP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 SEPT3Q9UH03 358 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 FEZ2Q9UHY8 353 aaPredicted RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 NDRG2Q9UN36 371 aaKnown RBP12.62□□□□□ -0.39
NIF3L1-201ENST00000359683 MTF2Q9Y483 593 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms