RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 B3GNT4Q9C0J1 378 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 IFT80Q9P2H3 777 aaPredicted RBP13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 CD300AQ9UGN4 299 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 NEMP1O14524 444 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 AURKAO14965 403 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 H2AFYO75367 372 aaKnown RBP13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 DEAF1O75398 565 aaPredicted RBP13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 ALDH1A2O94788 518 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 CAPGP40121 348 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 XAF1Q6GPH4 301 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 MFSD4AQ8N468 514 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 ARFGAP1Q8N6T3 406 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 LSMEM1Q8N8F7 131 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 CHAC2Q8WUX2 184 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 CYGBQ8WWM9 190 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 FKBP10Q96AY3 582 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 RTP4Q96DX8 246 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 MAGED4Q96JG8 741 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 OR2B2Q9GZK3 357 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
SPTSSB-201ENST00000359175 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 LRCH4O75427 683 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CLIC3O95833 236 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 AQP6Q13520 282 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 PRKG1Q13976 671 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 DLG2Q15700 870 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ATP6AP1Q15904 470 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CEP78Q5JTW2 689 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 C6orf10Q5SRN2 563 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 USP51Q70EK9 711 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 RALGPS2Q86X27 583 aaPredicted RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 LHPPQ9H008 270 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SDCBP2Q9H190 292 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CYP26B1Q9NR63 512 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 PRORSD1PA6NEY8 169 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ZSCAN5BA6NJL1 495 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SLC16A4O15374 487 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 BCAS1O75363 584 aaPredicted RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CUL2Q13617 745 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 B3GNT9Q6UX72 402 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CYP2R1Q6VVX0 501 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CHST15Q7LFX5 561 aaPredicted RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SPRED1Q7Z699 444 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 UNC5BQ8IZJ1 945 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ZFP90Q8TF47 636 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ATL1Q8WXF7 558 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 DHRS9Q9BPW9 319 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 FBXO8Q9NRD0 319 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 CCM2LQ9NUG4 571 aaPredicted RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 FKBP14Q9NWM8 211 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 RAP2CQ9Y3L5 183 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
SPTSSB-201ENST00000359175 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 RASAL1O95294 804 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 APRTP07741 180 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 RPL14P50914 215 aaKnown RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 GNG2P59768 71 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 STX1BP61266 288 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 AASDHQ4L235 1098 aaPredicted RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 BROXQ5VW32 411 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 CYP4V2Q6ZWL3 525 aaPredicted RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 PIWIL3Q7Z3Z3 882 aaKnown RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 LACC1Q8IV20 430 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 PCDH20Q8N6Y1 951 aaKnown RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 KCTD6Q8NC69 237 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 CANT1Q8WVQ1 401 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 ZNF606Q8WXB4 792 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 EMILIN2Q9BXX0 1053 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 UPF3AQ9H1J1 476 aaKnown RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 TBX20Q9UMR3 447 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 KPNA7A9QM74 516 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 G3V2L1 256 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 IDH3BO43837 385 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 MTRF1O75570 445 aaKnown RBP13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 STAM2O75886 525 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 FKBP9O95302 570 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 KRT6AP02538 564 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 KRT6BP04259 564 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 PSMA2P25787 234 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 PLA2G16P53816 162 aa13.48□□□□□ -0.25
SPTSSB-201ENST00000359175 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms