RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RPL10P27635 214 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LRPAP1P30533 357 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 KPNA2P52292 529 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 OAZ1P54368 228 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MS4A2Q01362 244 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 CELF3Q5SZQ8 465 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NAPEPLDQ6IQ20 393 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ZFP1Q6P2D0 407 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LDB1Q86U70 411 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 HERC6Q8IVU3 1022 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ACVR1CQ8NER5 493 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ZFP28Q8NHY6 868 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PABPC5Q96DU9 382 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ULBP1Q9BZM6 244 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 STN1Q9H668 368 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PFDN4Q9NQP4 134 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 RRN3Q9NYV6 651 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 COL5A3P25940 1745 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 SCN9AQ15858 1988 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NCF1BA6NI72 391 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NCF1CA8MVU1 366 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 PSMD12O00232 456 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 INPP4BO15327 924 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 RECQL4O94761 1208 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NCF1P14598 390 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.349e-10■■□□□ 13.4
CSDE1-203ENST00000358528 MAP4P27816 1152 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TPP2P29144 1249 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 SLC7A2P52569 658 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 LIMK2P53671 638 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 INHBEP58166 350 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 CEACAM7Q14002 265 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 SYPL2Q5VXT5 272 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 CLEC6AQ6EIG7 209 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 SH2D5Q6ZV89 423 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 ATPAF2Q8N5M1 289 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 DRAXINQ8NBI3 349 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 OR9I1Q8NGQ6 314 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 BTBD9Q96Q07 612 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 FTHL17Q9BXU8 183 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TRIM8Q9BZR9 551 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 FZD8Q9H461 694 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
CSDE1-203ENST00000358528 MOCS1Q9NZB8 636 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 NRAPQ86VF7 1730 aa6.67□□□□□ -1.34
CSDE1-203ENST00000358528 TRPC5OSA6NMA1 111 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PDLIM1O00151 329 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 XPOTO43592 962 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CLIC3O95833 236 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TGFB3P10600 412 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PAMP19021 973 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ACADSBP45954 432 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 HSPA13P48723 471 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ENPEPQ07075 957 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 GRM1Q13255 1194 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 MAPRE2Q15555 327 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ZIK1Q3SY52 487 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 SLC44A4Q53GD3 710 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 EPGNQ6UW88 154 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 RNF111Q6ZNA4 994 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 MOB2Q70IA6 237 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF534Q76KX8 674 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DHFR2Q86XF0 187 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 NT5DC4Q86YG4 428 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 OFCC1Q8IZS5 231 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CXorf38Q8TB03 319 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TMIGD2Q96BF3 282 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TUBGCP3Q96CW5 907 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TEPSINQ96N21 525 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 SARS2Q9NP81 518 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 UBAP1Q9NZ09 502 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 RSL24D1Q9UHA3 163 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CROTQ9UKG9 612 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PRPF19Q9UMS4 504 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CRYL1Q9Y2S2 319 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 A0A1B0GTW7 788 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 H3BRB1 525 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TRIM38O00635 465 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 GNGT2O14610 69 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 RNASEH2AO75792 299 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 BAIAP3O94812 1187 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ITGBL1O95965 494 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 JUNP05412 331 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 SETSIPP0DME0 302 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CYP2C8P10632 490 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 PTPN1P18031 435 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 EEF1DP29692 281 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 ARRB2P32121 409 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 MATKP42679 507 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CXCR3P49682 368 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CCR3P51677 355 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 CDH17Q12864 832 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 LAMC2Q13753 1193 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 TARBP2Q15633 366 aaKnown RBP6.66□□□□□ -1.34
CSDE1-203ENST00000358528 DPYSL2Q16555 572 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 UGP2Q16851 508 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 GPR107Q5VW38 600 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 SCIMPQ6UWF3 145 aa6.66□□□□□ -1.34
CSDE1-203ENST00000358528 SCN4BQ8IWT1 228 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms