RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 DCAKDQ8WVC6 231 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RTFDC1Q9BY42 306 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TRMT6Q9UJA5 497 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TESMINQ9Y4I5 508 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 FAM205CA6NFA0 338 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SLC37A4O43826 429 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ABCB7O75027 752 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HUNKP57058 714 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PPP3CAQ08209 521 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MERTKQ12866 999 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 IKBKEQ14164 716 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PIGGQ5H8A4 983 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TMC7Q7Z402 723 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DCP2Q8IU60 420 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SPERTQ8NA61 448 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RTP4Q96DX8 246 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NODALQ96S42 347 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZBTB26Q9HCK0 441 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 XRN1Q8IZH2 1706 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GRSF1Q12849 480 aaKnown RBP eCLIP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 OR56A4Q8NGH8 313 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GAB3Q8WWW8 586 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 FAM149B1Q96BN6 582 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TEFMQ96QE5 360 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PORCNQ9H237 461 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TASP1Q9H6P5 420 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PCDHGA10Q9Y5H3 936 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NALCNQ8IZF0 1738 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NUMA1Q14980 2115 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ILVBLA1L0T0 632 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MYO1DO94832 1006 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RORAP35398 523 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SPCS2Q15005 226 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NATD1Q8N6N6 113 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ANKRD60Q9BZ19 345 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SPATA31C1P0DKV0 1188 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LHX1P48742 406 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CLK2P49760 499 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PKNOX1P55347 436 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SLC44A2Q8IWA5 706 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CABLES1Q8TDN4 633 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF451Q9Y4E5 1061 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 M0QZ92 97 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MDM4O15151 490 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NDUFS3O75489 264 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PTTG1O95997 202 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 KDELR1P24390 212 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NFYCQ13952 458 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 IMPG1Q17R60 797 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RUNDC3AQ59EK9 446 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 OR6B2Q6IFH4 312 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DDIASQ8IXT1 998 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GGT7Q9UJ14 662 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZBTB1Q9Y2K1 713 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CACNA1CQ13936 2221 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 KPNA3O00505 521 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RNASEH1O60930 286 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 IFNA7P01567 189 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 EIF2AK2P19525 551 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MCCD1P59942 119 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NOMO3P69849 1222 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NEPROQ6NW34 567 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 EPGNQ6UW88 154 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DUS3LQ96G46 650 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HPDLQ96IR7 371 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC90BQ9GZT6 254 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PCIF1Q9H4Z3 704 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TEX51A0A1B0GUA7 166 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NOS1APO75052 506 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MED24O75448 989 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 LRIG2O94898 1065 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 YES1P07947 543 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 HOXA13P31271 388 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NAGLUP54802 743 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 SEMA5AQ13591 1074 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 INO80DQ53TQ3 878 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 FAM102AQ5T9C2 384 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 C16orf46Q6P387 395 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 DCLRE1AQ6PJP8 1040 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZZZ3Q8IYH5 903 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CERS2Q96G23 380 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 METTL2AQ96IZ6 378 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 CYP2D7A0A087X1C5 515 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZSCAN9O15535 394 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 GABARAPL2P60520 117 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZFP69Q49AA0 526 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 STRADAQ7RTN6 431 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 RAB43Q86YS6 212 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM132CQ8N3T6 1108 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF560Q96MR9 790 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 IDI2Q9BXS1 227 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PRR12Q9ULL5 1215 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 PPM1HQ9ULR3 514 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF510Q9Y2H8 683 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L10C9JJH3 530 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 NDUFB10O96000 172 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 TFRCP02786 760 aaKnown RBP4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MYF6P23409 242 aa4.16□□□□□ -1.74
SYNE2-204ENST00000358025 MAGEA10P43363 369 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms